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  5. PTI_15G03630.1

PTI_15G03630.1


Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_15G03630.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Cre08.g371400 30773476 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
Cz10g28200.t1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
EOD25132 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Sro117_g057280.1 Contig3937.g30172 Protein ligase Arkadia 0.02 OrthoFinder
Sro1292_g260020.1 Contig3668.g28343 Protein ligase Arkadia 0.02 OrthoFinder
Sro239_g096030.1 Contig3063.g24399 Protein ligase RNF181 0.02 OrthoFinder
Sro366_g127550.1 Contig1993.g17064 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold1315.2 1315.2 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold5269.2 5269.2 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498945.1_7898 KAA8498945 E3 ubiquitin-protein ligase 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495598.1_1596 KAA8495598 E3 ubiquitin-protein ligase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 309 352
No external refs found!