PTI_15G03160.1


Description : DHHA1 domain; Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD [Interproscan].


Gene families : OG_01_0000762 (OrthoFinder) Phylogenetic Tree(s): OG0000762_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_15G03160.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020703.19 tig00020703_g13121.t1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 OrthoFinder
Cre02.g143200 30784969 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder
Dusal.0383s00009.1 33199473 Alanyl-tRNA synthetase, class IIc, N-terminal [Interproscan]. 0.03 OrthoFinder
OT_04G04780.1 No alias Threonyl/alanyl tRNA synthetase, SAD; Glutathione... 0.04 OrthoFinder
OT_07G01920.1 No alias Threonyl/alanyl tRNA synthetase, SAD; Alanyl-tRNA... 0.05 OrthoFinder
Sro372_g128770.1 Contig2891.g23057 Alanine--tRNA ligase 0.07 OrthoFinder
Sro582_g170560.1 Contig2996.g23812 Alanine--tRNA ligase 0.02 OrthoFinder
Transcript_contig_54043 54043 Threonyl/alanyl tRNA synthetase, SAD; Alanyl-tRNA... 0.02 OrthoFinder
UNPLg00218.t1 No alias Threonyl/alanyl tRNA synthetase, SAD; DHHA1 domain;... 0.02 OrthoFinder
Vocar.0020s0078.1 32886644 DHHA1 domain; Threonyl/alanyl tRNA synthetase, SAD;... 0.02 OrthoFinder
XM_002504787.1 MICPUN_62346, 62346 Alanyl-tRNA synthetase 0.02 OrthoFinder
lcl|LHPG02000006.1_cds_PRW58002.1_8495 PRW58002 Alanine-tRNA ligase isoform A 0.03 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494101.1_3965 KAA8494101 Alanine--tRNA ligase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0004813 alanine-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006419 alanyl-tRNA aminoacylation IEA Interproscan
BP GO:0043039 tRNA aminoacylation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043486 histone exchange IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR012947 tRNA_SAD 716 775
IPR018164 Ala-tRNA-synth_IIc_N 19 604
IPR003156 DHHA1_dom 831 971
No external refs found!