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  5. PTI_15G01980.1

PTI_15G01980.1


Description : Actin family [Interproscan].


Gene families : OG_01_0000106 (OrthoFinder) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_15G01980.1
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000319.25 tig00000319_g24138.t1 Cytoskeleton.microfilament network.actin filament protein 0.01 OrthoFinder
Cpa|evm.model.tig00001408.21 tig00001408_g8615.t1 Actin-related protein 6 OS=Oryza sativa subsp. indica 0.01 OrthoFinder
Cre13.g603700 30784404 Cytoskeleton.microfilament network.actin filament protein 0.03 OrthoFinder
Dusal.0175s00014.1 33199727 Actin family [Interproscan]. 0.01 OrthoFinder
OT_16G00440.1 No alias Actin family [Interproscan]. 0.02 OrthoFinder
Sro762_g198640.1 Contig3620.g28005 Actin-66 (Fragment) 0.02 OrthoFinder
TP22G02480.1 No alias Actin family [Interproscan]. 0.03 OrthoFinder
Transcript_contig_55399 55399 Actin family [Interproscan]. 0.01 OrthoFinder
XM_003058779.1 MicpuC2_47282, 47282 Actin superfamily 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004000 Actin 6 377
No external refs found!