Heatmap: Cluster_71 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
0.32 0.72 0.36 0.78 0.14 0.67 0.99 -0.04 0.57 0.61 - - - - 0.58 -0.31 0.59 0.36 0.56 -1.16 -0.31 0.6 -0.83 0.72 -1.08 - - 0.84 -0.31 1.16 1.1 0.54 - - -
-0.09 1.59 -0.46 1.21 -0.39 0.22 1.62 -0.01 0.29 0.63 -0.06 0.34 -0.85 0.38 -0.76 -1.42 -0.28 0.34 0.42 0.13 -2.28 -1.22 -2.24 -1.86 -2.38 -1.14 -0.86 -0.19 -0.24 -0.28 -0.12 0.03 -0.35 0.99 -3.33
-0.52 -0.45 -0.34 -0.37 0.01 -0.08 0.3 -0.32 0.01 0.01 -1.97 -2.5 -0.15 -0.21 0.03 0.02 0.27 0.82 1.14 0.34 -1.62 -0.1 -1.47 0.64 -0.24 -0.48 -0.53 -0.33 0.02 1.27 1.16 1.15 -2.18 -1.03 -1.02
0.27 0.83 0.24 0.81 -0.23 0.48 0.84 0.29 0.34 0.47 -1.44 -1.4 -0.96 -0.68 -0.71 -0.38 -2.06 0.87 0.78 -0.96 0.07 0.19 -0.59 -0.12 -1.14 -0.42 -0.55 -0.38 -0.23 0.61 0.37 1.02 -1.38 -0.43 -1.53
-0.91 -0.12 -0.36 0.73 -0.04 -0.42 0.25 0.19 -0.7 -0.16 -0.58 -0.2 -0.71 1.33 -0.27 0.0 0.07 0.89 0.87 -0.62 -1.66 0.01 -1.56 0.14 -1.06 -0.29 -1.75 -1.13 0.2 0.65 0.94 0.56 -0.1 0.05 -0.38
-0.55 0.25 -0.0 1.3 0.26 -0.02 0.7 0.77 -0.35 0.19 -0.83 -0.48 -1.62 0.4 -0.37 -0.14 -0.36 0.65 0.37 -0.52 -1.1 0.41 -0.94 0.14 -0.76 0.22 -1.73 -0.61 -0.15 0.45 1.1 -0.02 -0.35 -0.43 -2.11
-0.18 0.82 0.28 0.96 -0.94 0.25 0.98 1.62 0.25 0.53 -0.36 -0.11 -1.61 -1.52 -0.5 0.18 -0.99 -0.17 -0.21 -0.12 -0.5 0.61 -0.38 -0.99 -2.37 -1.47 -2.44 0.53 -0.79 -0.28 -0.71 0.39 -0.0 0.43 0.07
-0.05 0.55 0.24 1.16 0.61 0.35 0.52 1.42 0.62 0.51 -1.43 -1.26 -6.48 -1.02 -0.9 -0.59 -0.41 1.24 1.3 -1.87 0.34 1.65 -0.31 -0.82 -3.09 -7.04 -5.2 0.17 -0.26 -2.1 -1.48 -1.9 -1.2 0.61 -2.09
0.05 0.16 0.65 0.41 -0.07 1.25 0.17 0.68 1.35 1.23 -1.96 -2.96 -2.48 -2.63 -0.28 -0.29 -2.45 -0.18 0.16 -1.2 1.15 0.72 0.23 0.4 -0.35 -2.88 -4.35 -2.72 -0.52 0.68 0.99 0.23 -2.2 -0.38 -3.82
0.28 0.59 0.07 0.44 0.08 0.35 0.41 0.38 0.23 0.19 -0.69 -0.52 -0.81 -0.5 0.45 -0.04 0.09 0.59 0.22 -0.24 -0.36 -0.19 -0.17 -0.3 -1.43 -0.05 -0.18 -0.28 -0.61 0.25 0.36 0.2 -0.6 0.29 -0.92
-0.28 0.9 -0.01 0.8 -0.44 -0.05 1.07 -0.68 -0.23 0.19 -0.32 0.14 0.65 -0.32 -0.02 -0.13 0.52 0.33 0.91 -0.55 -2.43 -1.18 -2.67 -0.6 -1.93 0.32 -0.45 -0.93 -2.19 0.12 0.29 -0.07 0.14 0.58 0.54
-0.25 0.35 -0.86 0.81 0.27 -0.06 1.05 -0.59 0.09 0.38 -0.19 0.32 0.37 0.41 -0.89 -0.9 -0.78 0.89 0.9 0.09 -1.97 -0.87 -1.54 -0.22 -0.88 -1.08 -1.52 0.44 -0.05 -0.1 -0.52 0.61 0.34 0.32 -0.4
-0.44 1.38 -0.02 1.19 -0.19 0.5 1.43 1.08 0.34 0.55 -1.18 -1.08 0.13 0.06 -0.44 -0.92 0.09 0.79 0.41 -0.83 -3.51 -2.11 -3.86 -0.08 -1.22 -0.63 -1.79 -1.49 -1.54 0.67 0.35 1.14 -0.98 -0.89 -5.25
0.26 1.12 0.64 1.4 0.35 0.8 1.24 1.81 0.09 0.74 -0.71 -0.6 -0.54 -1.52 -0.93 -0.6 -1.13 0.22 0.18 -1.23 -0.75 -0.45 -0.8 0.18 -0.23 -1.52 -2.57 -0.83 -0.37 -0.94 -1.27 -0.68 -0.24 -0.26 -2.57
-0.08 0.34 0.1 0.53 -1.31 -0.18 0.31 0.06 -0.92 -0.4 -0.38 -0.0 -0.32 0.39 0.37 -0.09 0.29 0.8 1.14 1.17 -3.33 -0.98 -3.65 -0.28 -2.45 -0.53 -0.99 -0.81 0.18 0.53 0.01 0.96 0.13 0.63 -1.87
0.76 0.95 0.31 0.79 -0.16 0.18 0.52 -0.04 0.24 0.53 - - -1.8 - 0.4 -0.34 1.17 0.57 1.09 -0.47 -2.83 -1.44 -3.65 0.36 -1.07 -4.77 -5.41 0.47 0.09 1.36 0.57 1.78 -8.95 - -
-0.3 -0.02 -0.3 0.23 -0.13 -0.28 0.52 -0.39 0.02 0.46 -1.3 -1.08 -2.05 -0.86 0.14 -0.18 0.32 0.66 1.23 1.29 -0.63 0.1 -0.06 -0.2 -0.18 -5.7 -7.48 0.21 0.36 0.78 0.49 0.52 -1.1 -1.01 0.26
-0.79 0.07 -0.5 0.33 -0.62 -0.39 0.37 0.71 -0.37 -0.16 -0.06 -0.1 -0.09 -0.73 -0.29 -0.17 -0.99 0.66 0.87 0.28 -1.31 0.03 -1.6 -0.14 -0.44 0.89 0.86 -0.31 -0.38 0.37 0.18 0.39 0.04 -0.41 -0.07
-0.37 0.51 0.4 1.4 -0.05 -0.29 0.65 0.98 -0.63 -0.07 -0.63 -0.14 -0.04 -0.52 -0.75 -0.07 0.26 0.39 0.63 -0.51 -3.87 -1.55 -3.81 -0.81 -2.29 -0.85 -3.54 -1.35 -0.2 0.02 0.3 0.36 -0.18 1.5 0.98
-0.39 0.79 0.43 1.92 -0.13 0.59 1.45 0.66 0.75 0.8 -1.68 -1.07 -0.36 -0.03 -1.51 -0.73 -2.98 -0.43 -0.46 -0.26 -0.89 -0.05 -1.4 -0.18 -1.78 -0.74 -1.92 0.22 -0.71 0.33 0.1 0.49 -1.01 -0.06 -1.17
-0.72 1.81 0.07 1.63 -1.7 -1.95 1.39 0.85 -1.72 -0.47 -1.36 -1.12 0.21 0.91 -1.41 -1.75 -0.87 0.91 0.93 -0.31 -1.5 -1.02 -2.1 -0.95 -1.33 -1.04 -1.91 -1.2 -2.07 0.71 -0.34 1.45 -2.14 1.02 -2.46
-0.67 -0.09 -0.66 -0.0 -0.01 -0.36 0.0 -0.96 -0.26 -0.37 -0.98 -0.4 0.44 0.58 0.23 0.49 -1.31 1.01 1.18 1.33 -1.82 -1.09 -0.98 -0.07 -0.42 -0.98 -1.73 -0.24 -0.01 0.16 -0.08 0.52 -0.31 0.33 0.9
0.5 1.74 0.69 1.35 0.36 0.58 1.18 0.52 -0.21 0.91 -3.91 -3.06 -0.51 -4.97 -0.51 0.39 -0.68 0.26 0.45 0.76 -2.36 -0.76 -2.31 -0.05 -1.08 - - -4.21 -2.3 1.2 1.07 0.79 -3.35 -3.2 -6.2
-1.42 -0.47 -0.52 0.15 -0.49 -0.8 0.6 -0.31 -0.15 -0.19 -1.27 -1.14 1.18 -0.16 0.36 0.47 0.61 1.01 1.51 0.97 -0.08 0.09 -1.01 0.24 -1.53 -1.8 -3.05 -0.29 0.07 -0.03 -0.54 0.55 -0.78 -0.35 -0.25
0.25 0.29 -0.31 0.41 -3.44 0.61 1.5 -1.15 -0.32 0.11 -4.79 -2.52 -1.08 -1.78 -2.53 0.98 - 2.37 2.15 2.71 - - - -0.6 - -0.84 -12.13 0.73 -0.79 - - - -2.35 -1.44 -1.29
0.31 0.54 0.13 0.55 -0.0 0.38 0.74 -0.16 0.43 0.38 -0.38 -0.14 -0.93 -0.52 -0.83 -1.14 -1.83 0.11 -0.12 -0.67 0.17 0.59 -0.19 -0.57 -2.1 -1.28 -1.77 0.78 -1.21 0.33 -0.4 0.82 -0.04 0.9 0.61
-0.35 0.3 -0.48 0.27 -0.62 -0.58 0.11 -0.12 -1.01 -0.5 0.34 0.57 -1.94 -1.14 -0.18 -0.35 -2.13 0.47 0.24 -0.01 -0.94 0.36 -2.27 0.15 -0.67 0.7 0.69 -0.69 -0.57 0.97 0.9 0.95 0.27 0.95 -1.16
-0.08 0.88 -0.25 0.85 -0.01 0.2 0.93 -0.11 -0.07 0.32 0.04 0.42 -0.67 -1.11 -0.27 0.08 0.14 0.45 0.64 -0.72 -1.09 0.35 -1.61 -0.75 -1.93 -0.28 -1.44 0.0 -0.98 -0.33 -0.07 -0.21 0.38 0.27 0.73
-0.08 0.87 0.78 1.75 0.01 0.05 0.96 1.36 -0.38 0.15 -1.08 -0.73 0.68 -1.7 -1.0 -0.41 -0.0 0.22 0.42 -0.12 -2.43 -0.74 -2.55 -0.63 -2.09 0.44 -2.23 -0.99 0.25 -0.24 -0.0 0.02 -0.88 -0.1 -0.72
0.44 0.93 0.85 1.57 -0.59 0.57 0.9 1.92 0.28 0.6 -0.74 -0.89 -2.11 -2.42 -2.5 -0.79 -2.89 -0.29 0.23 -2.85 -2.8 -1.16 -4.11 -1.19 -2.9 0.56 -0.24 1.16 0.11 -0.24 0.15 -0.83 -0.9 0.16 -0.26
0.06 0.41 -0.19 0.34 -0.29 0.41 0.61 -0.17 0.14 0.3 -1.03 -0.84 -1.58 -0.48 -0.18 -0.95 -0.02 0.45 0.08 -0.45 -1.74 -1.33 -1.69 0.62 -0.43 1.12 0.82 -0.57 -0.57 0.73 0.37 1.15 -0.73 0.22 -1.16
-0.58 0.31 -0.28 1.18 0.27 -0.43 1.02 -0.14 -0.57 -0.02 0.12 0.66 -0.83 -0.11 -0.3 -0.15 -0.98 0.96 1.11 -1.02 -3.12 -0.77 -2.3 -0.37 -0.94 -1.51 -3.02 -0.16 -0.09 0.22 -0.23 0.99 0.8 0.78 -1.02
-0.56 0.47 -0.45 0.94 -0.31 -0.23 1.25 0.31 -0.13 0.33 0.06 0.41 0.48 -0.57 -0.8 -0.22 -0.41 0.89 1.14 -1.14 -2.05 -0.46 -2.04 -0.98 -2.23 -0.1 -0.21 -0.82 0.27 -0.41 -0.17 -0.0 0.57 0.68 -1.11
0.22 0.77 0.04 0.68 -0.49 0.24 0.67 -0.3 0.06 0.46 -0.87 -0.56 1.54 0.24 -0.95 -0.9 -0.86 0.19 0.23 -0.34 -0.36 -0.27 -1.11 -1.22 -2.13 -0.95 -1.53 0.12 -0.49 0.43 -0.28 0.77 -0.5 0.39 0.59
0.21 1.38 0.37 1.24 0.3 0.53 1.44 0.87 0.52 0.73 -1.42 -1.11 -0.2 0.55 -0.87 -0.83 -0.09 -0.41 -0.56 -1.42 -0.36 -0.11 -0.64 0.14 -1.15 -0.93 -1.41 -0.86 -0.48 -0.5 0.06 -0.22 -1.32 -0.35 -1.28
-1.15 0.64 -0.66 0.67 -0.49 -0.62 1.33 -0.28 -0.58 0.23 0.31 0.54 1.23 0.97 -0.88 -0.9 -0.38 0.73 0.78 0.78 -3.54 -1.67 -3.57 -0.24 -2.21 -0.65 -1.49 -5.67 -1.67 0.03 0.45 0.52 0.04 1.33 -5.13
0.16 1.47 0.75 1.02 -0.27 0.63 0.58 1.05 0.07 0.95 -1.11 -1.27 -0.86 -0.92 -0.41 0.23 -1.29 0.6 0.01 -0.07 0.17 0.95 -0.74 -0.58 -1.55 0.7 -0.48 -3.02 -1.22 -0.48 0.35 -1.35 -0.96 -2.31 -3.93
-0.11 0.32 0.23 0.52 -0.11 0.13 0.4 1.16 0.15 0.21 -0.96 -0.67 0.85 -0.3 -0.76 -1.08 -0.36 0.28 0.59 -0.22 -0.71 -0.47 -0.9 0.35 -1.03 -1.29 -1.67 0.17 -0.36 0.53 0.31 0.69 -0.58 -0.26 0.16
-0.29 0.06 -0.45 0.23 -0.49 -0.24 0.44 -0.82 -0.11 -0.23 -0.29 -0.36 -1.08 -0.7 -0.38 -0.63 -0.57 0.43 0.47 0.33 -1.61 -0.69 -1.8 0.17 0.47 1.14 0.96 -0.12 -0.62 0.49 0.85 0.2 -0.12 0.53 0.03
0.37 0.78 0.2 0.9 -0.37 0.43 0.78 0.42 0.04 0.37 -1.35 -0.9 -0.82 0.13 -0.8 -0.7 -2.1 0.57 0.88 -0.06 -1.07 -0.28 -1.62 0.21 -0.94 -0.22 -0.58 -1.07 -0.41 0.54 0.25 0.99 -1.1 0.78 -1.75
-0.46 1.08 -0.06 1.33 -0.51 -0.01 1.56 -0.1 -0.09 0.48 -0.1 0.18 -1.08 -0.74 -0.84 0.04 -0.58 0.34 0.69 -0.5 -3.05 -1.47 -2.6 -0.36 -0.69 0.09 0.28 -0.98 -0.09 -0.21 -0.18 0.28 0.34 0.18 -0.57
-0.4 0.37 0.35 0.82 0.15 -0.03 0.16 1.87 -0.24 0.21 -1.23 -0.98 -1.63 -0.05 0.75 1.02 1.03 0.4 0.48 -0.57 -1.74 -0.3 -1.83 -0.54 -2.15 -0.33 -1.44 -0.86 -0.65 -0.06 0.48 -1.11 -0.97 0.04 -0.54
0.15 1.14 0.11 0.94 -0.41 0.16 1.09 -0.42 0.07 0.8 -0.18 0.17 -0.64 -2.75 -0.17 0.07 -0.26 0.25 0.62 -0.68 -0.73 0.28 -1.16 -0.47 -1.88 0.1 -0.61 0.14 -1.01 -0.2 0.21 -0.36 0.44 -0.09 -0.97
-0.02 0.11 -0.23 0.17 -0.43 1.08 0.74 0.57 0.43 0.36 -0.26 -1.52 -1.35 -1.26 -0.02 -0.71 0.09 0.61 1.06 -0.29 -1.97 -0.17 -2.17 0.53 -0.48 -0.64 0.17 -2.74 -0.42 0.63 0.68 0.97 -1.92 0.5 -2.16
-0.19 0.16 -0.03 0.42 0.0 0.24 0.39 0.2 0.43 0.43 -0.99 -0.98 0.44 -1.13 -0.23 -0.01 -0.28 0.39 0.59 0.38 -0.77 -0.8 -0.52 0.33 -0.16 -0.64 -1.63 0.54 -0.06 0.56 0.38 0.73 -0.88 -0.6 -0.45
-0.3 0.91 0.63 0.83 -0.09 -0.12 0.13 2.85 -1.32 -0.53 -0.89 -1.2 -2.69 -2.15 0.12 0.06 -0.67 1.05 0.98 -0.66 -0.35 0.14 -0.98 -0.85 -1.47 0.16 -0.83 -2.49 -0.89 -0.34 0.35 -1.5 -0.97 -1.83 -5.19
-0.3 0.91 0.63 0.83 -0.09 -0.12 0.13 2.85 -1.32 -0.53 -0.89 -1.2 -2.69 -2.15 0.12 0.06 -0.67 1.05 0.98 -0.66 -0.35 0.14 -0.98 -0.85 -1.47 0.16 -0.83 -2.49 -0.89 -0.34 0.35 -1.5 -0.97 -1.83 -5.19
0.81 0.75 0.56 0.46 -0.32 0.58 0.22 0.7 -0.11 0.25 -2.13 -1.44 -0.74 -1.35 0.28 -0.31 -0.86 0.46 -0.1 -0.04 -0.73 -0.5 -1.54 -0.31 -2.16 0.32 0.55 -0.35 -0.22 0.76 0.49 0.89 -1.65 0.54 -1.7
0.68 1.42 0.3 1.1 -0.14 0.49 0.81 0.41 -0.13 0.28 -0.3 -0.02 -2.63 0.26 -1.16 -1.75 -1.21 0.41 1.1 -1.44 -2.49 -0.63 -2.03 -2.2 -2.68 -0.96 -0.9 -1.14 -1.04 1.07 0.25 1.47 -1.54 0.81 -3.7
0.44 0.7 0.02 1.11 -0.82 0.85 1.26 -0.07 0.24 0.16 -0.7 -0.6 -4.85 -0.75 -0.44 -1.57 -0.58 0.58 1.48 -4.46 -2.72 -2.06 -6.08 -1.21 -2.64 0.92 2.04 -1.83 -2.2 0.37 0.31 0.45 -1.2 -0.13 -3.12
-1.46 -0.51 -1.14 -0.47 -0.61 -0.91 -0.13 -0.98 -0.33 -0.13 1.22 1.3 0.42 0.82 -1.14 -0.85 -1.25 1.59 1.48 -1.4 -1.61 -0.88 -1.08 -0.03 -1.18 -2.43 -4.57 -1.79 -2.64 0.75 -0.43 1.59 1.38 -0.34 -0.59
-0.71 -0.07 -1.17 0.12 -0.16 0.33 0.48 -0.32 0.63 0.76 -1.08 -1.03 -0.29 -1.27 -1.32 1.28 -1.52 0.68 0.44 0.02 -0.55 -0.63 -0.32 0.09 -0.04 -0.41 -0.05 0.1 0.01 0.86 0.24 0.87 -0.78 -0.78 0.04
-0.21 0.34 -0.14 0.34 0.11 0.31 0.51 0.65 0.4 0.61 -0.46 -0.6 -0.62 -0.92 -0.72 0.69 -0.45 0.08 0.76 0.21 -2.14 -0.62 -1.93 0.1 -2.22 -1.49 -2.35 -0.73 -0.27 0.81 0.11 1.16 -0.59 0.87 0.22
0.08 1.1 0.44 0.59 0.21 0.49 0.41 1.42 0.11 0.58 -0.76 -0.81 -1.21 -0.42 -0.05 -0.63 0.58 0.26 0.21 -0.24 0.44 0.19 -0.55 0.32 -0.7 -0.89 -1.64 -1.55 -0.86 -0.21 0.3 -0.28 -0.61 -0.63 -2.94
-0.28 0.37 -1.14 -0.02 0.11 -0.25 0.26 -0.23 -0.49 0.31 0.37 0.6 -0.67 -0.88 -0.85 -0.31 -2.79 1.8 1.48 -1.27 0.33 0.73 0.02 -1.81 -1.91 -0.85 -2.09 0.34 -0.3 -0.65 -1.06 0.14 0.7 0.17 0.03
0.94 1.14 -0.52 0.82 - 0.88 -14.92 0.78 1.29 1.2 - - - - - 0.7 - 2.2 2.22 -1.44 - - - - - -0.36 1.08 2.41 -6.05 -2.82 -0.98 - - -30.25 -
0.24 0.84 0.43 0.9 -0.1 0.26 0.52 0.27 -0.28 0.21 -1.34 -1.14 -0.6 -0.28 -0.17 0.08 0.09 0.42 0.41 0.02 -1.68 -0.58 -2.04 0.25 -0.77 -0.61 -1.49 -0.11 -0.42 0.62 0.42 0.96 -1.1 0.23 -0.13
-0.09 0.15 -0.53 0.0 -0.21 0.15 0.3 -0.47 0.35 0.55 -0.42 -0.59 -0.99 -1.67 -0.38 0.51 -1.38 0.57 0.57 -0.07 -0.75 -0.45 -0.48 0.37 -0.09 -0.83 -1.2 1.07 0.18 0.81 0.22 1.25 -0.35 -0.46 -0.82

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.