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Description : High mobility group box domain [Interproscan].
Gene families : OG_01_0000118 (OrthoFinder) Phylogenetic Tree(s): OG0000118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_15G00280.1 | |
| Cluster | HCCA: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000157.32 | tig00000157_g9622.t1 | No description available | 0.01 | OrthoFinder | |
| Sro2137_g316050.1 | Contig702.g8144 | Group protein B1 | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000339 | RNA cap binding | IEP | Enrichment |
| MF | GO:0000340 | RNA 7-methylguanosine cap binding | IEP | Enrichment |
| MF | GO:0003729 | mRNA binding | IEP | Enrichment |
| MF | GO:0005436 | sodium:phosphate symporter activity | IEP | Enrichment |
| BP | GO:0006772 | thiamine metabolic process | IEP | Enrichment |
| BP | GO:0006817 | phosphate ion transport | IEP | Enrichment |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | Enrichment |
| MF | GO:0015081 | sodium ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015294 | solute:cation symporter activity | IEP | Enrichment |
| MF | GO:0015370 | solute:sodium symporter activity | IEP | Enrichment |
| CC | GO:0042597 | periplasmic space | IEP | Enrichment |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044341 | sodium-dependent phosphate transport | IEP | Enrichment |
| MF | GO:0044877 | protein-containing complex binding | IEP | Enrichment |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009071 | HMG_box_dom | 108 | 161 |
| No external refs found! |