1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_14G02370.1

PTI_14G02370.1


Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_14G02370.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Sro556_g165970.1 Contig1584.g14388 Receptor homology region, transmembrane domain- and RING... 0.02 OrthoFinder
SymbC1.scaffold1315.2 1315.2 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
TP04G01820.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_002499986.1 MICPUN_56207, 56207 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001186.1_cds_GFH17690.1_12167 HaLaN_14375, GFH17690 E3 ubiquitin-protein ligase AIP2 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 168 212
No external refs found!