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  5. PTI_13G02060.1

PTI_13G02060.1


Description : ABC transporter type 1, transmembrane domain; ABC transporter-like [Interproscan].


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_13G02060.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000741.4 tig00000741_g3824.t1 ABC transporter B family member 21 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre17.g725150 30782210 ABC transporter B family member 7 OS=Arabidopsis thaliana 0.02 OrthoFinder
EOD15929 No alias Putative ABC transporter [Ensembl]. 0.02 OrthoFinder
EOD26441 No alias Putative ABC transporter [Ensembl]. 0.02 OrthoFinder
EOD31963 No alias Putative ABC transporter [Ensembl]. 0.02 OrthoFinder
Sro316_g115550.1 Contig2414.g19761 Leptomycin B resistance protein pmd1 0.02 OrthoFinder
Sro84_g044670.1 Contig220.g2600 Leptomycin B resistance protein pmd1 0.02 OrthoFinder
XM_002505595.1 MICPUN_87670, 87670 ATP-binding cassette superfamily 0.03 OrthoFinder
XM_002505884.1 MICPUN_88240, 88240 ATP-binding cassette superfamily 0.02 OrthoFinder
lcl|BLLF01000498.1_cds_GFH12386.1_6863 HaLaN_08063, GFH12386 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494946.1_3476 KAA8494946 Multidrug resistance protein 1B 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000255 allantoin metabolic process IEP Enrichment
BP GO:0000256 allantoin catabolic process IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004037 allantoicase activity IEP Enrichment
MF GO:0004484 mRNA guanylyltransferase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0004651 polynucleotide 5'-phosphatase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Enrichment
BP GO:0006370 7-methylguanosine mRNA capping IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008192 RNA guanylyltransferase activity IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
BP GO:0043605 cellular amide catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0070568 guanylyltransferase activity IEP Enrichment
MF GO:0098518 polynucleotide phosphatase activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 737 884
IPR011527 ABC1_TM_dom 1016 1316
IPR011527 ABC1_TM_dom 49 297
IPR003439 ABC_transporter-like_ATP-bd 450 599
No external refs found!