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  5. PTI_12G03100.1

PTI_12G03100.1


Description : Hypothetical protein


Gene families : OG_01_0000023 (OrthoFinder) Phylogenetic Tree(s): OG0000023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_12G03100.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cre16.g660331 30777050 No description available 0.03 OrthoFinder
PTI_10G02830.1 No alias Integrase, catalytic core; gag-polypeptide of LTR... 0.05 OrthoFinder
PTI_20G00860.1 No alias gag-polypeptide of LTR copia-type [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
CC GO:0031464 Cul4A-RING E3 ubiquitin ligase complex IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!