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  5. PTI_12G01820.1

PTI_12G01820.1


Description : Beta-Casp domain; Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term; Metallo-beta-lactamase; Zn-dependent metallo-hydrolase, RNA specificity domain [Interproscan].


Gene families : OG_01_0001543 (OrthoFinder) Phylogenetic Tree(s): OG0001543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_12G01820.1
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Dusal.0152s00021.1 33186208 Metallo-beta-lactamase; Zn-dependent metallo-hydrolase,... 0.02 OrthoFinder
Vocar.0009s0162.1 32893191 Beta-Casp domain; Zn-dependent metallo-hydrolase, RNA... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006623 protein targeting to vacuole IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016255 attachment of GPI anchor to protein IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0072665 protein localization to vacuole IEP Enrichment
BP GO:0072666 establishment of protein localization to vacuole IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 22 190
IPR022712 Beta_Casp 242 365
IPR021718 CPSF73-100_C 481 727
IPR011108 RMMBL 381 429
No external refs found!