Heatmap: Cluster_70 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
-0.03 0.55 -0.38 0.27 -0.76 -0.05 0.3 -0.42 -0.09 0.07 -0.78 -0.67 -1.64 1.15 -1.08 -0.28 -1.67 0.33 0.48 -1.64 1.05 1.1 0.99 -0.6 -2.52 -2.17 -2.34 0.44 -0.3 -0.57 -0.86 -0.18 -1.0 0.42 1.66
-0.83 -0.3 -0.7 -0.03 -0.51 -0.42 0.28 -0.33 -0.18 -0.13 0.36 0.6 -0.8 0.26 -1.56 -1.18 -3.57 -0.46 0.2 -0.5 0.44 0.83 -0.08 0.55 -0.49 -1.11 0.43 -0.08 -0.15 0.85 0.53 0.66 0.38 0.31 0.55
-1.6 -0.18 -1.73 0.09 -0.51 -0.67 0.55 -1.64 0.22 -0.13 -1.56 -1.4 0.96 1.01 -2.15 -1.19 -2.98 0.19 -0.01 -0.2 1.18 -0.04 0.95 -0.56 0.8 0.56 1.07 -2.12 -0.27 0.39 -0.85 0.97 -1.38 -0.44 0.67
-0.09 0.07 -0.61 -0.04 0.21 0.09 0.36 -0.51 0.23 0.37 -0.33 -0.16 -0.45 -0.07 -0.21 -0.61 -0.72 -0.2 -0.15 0.35 0.29 0.67 0.23 0.52 -0.78 -0.19 -0.63 0.03 -0.76 0.21 -0.08 0.45 -0.12 0.87 -0.31
-0.87 -0.62 -0.93 -0.46 -0.53 -0.67 -0.24 -0.9 -0.19 -0.21 -0.17 0.18 -0.48 0.98 -1.42 -1.1 -2.46 0.06 0.12 -0.32 0.4 0.66 0.8 -0.15 -0.14 -0.82 0.44 -0.17 0.11 0.7 0.78 0.57 0.12 -0.1 1.18
0.01 -0.16 -0.34 -0.22 0.08 0.2 -0.08 -0.29 0.22 0.14 0.02 0.29 -0.05 -0.15 -0.55 -0.58 -1.36 0.14 -0.01 -0.63 0.77 0.58 0.71 0.07 -0.41 -1.13 -0.86 -0.16 -0.69 0.53 0.54 0.54 0.2 -0.42 0.29
-0.47 -0.06 -0.08 0.38 -0.85 0.03 0.68 0.37 0.23 0.42 -0.57 -0.13 0.55 -0.02 -1.61 -1.5 -3.21 -0.13 0.19 -0.81 0.93 0.72 -0.4 0.34 -1.46 -0.41 0.29 -0.71 -0.44 0.51 0.2 0.39 -0.27 -0.16 0.81
-0.11 -0.13 -0.11 -0.22 0.05 0.12 -0.45 -0.11 0.16 -0.07 0.38 0.35 -0.26 0.39 -0.2 -0.9 -1.2 -0.0 -0.22 -1.05 1.03 0.86 0.49 0.64 -0.76 -0.38 -1.28 0.14 -0.87 -0.36 -0.27 -0.72 0.49 0.41 0.51
-0.54 -0.27 -0.69 -0.29 -0.86 -0.08 -0.14 -0.34 -0.09 0.02 -0.23 0.04 -0.73 0.92 -0.79 -0.15 -3.03 -0.03 0.21 -0.16 0.98 0.88 0.59 0.07 -0.8 -0.52 0.49 -0.29 0.48 -0.15 0.54 -0.29 -0.03 0.12 0.47
-1.44 -0.83 -1.37 -0.77 -0.92 -0.96 -0.39 -0.87 -0.76 -0.52 0.03 0.05 -0.51 0.92 -1.73 -1.06 -2.8 -0.55 -0.09 -0.29 0.7 1.17 0.71 0.4 -0.28 -0.38 0.91 -0.64 0.2 1.15 0.82 1.22 -0.11 -0.21 0.32
-1.9 -0.49 -1.65 -0.22 -0.96 -1.51 -0.02 -0.72 -1.06 -1.62 0.38 -0.05 -0.23 0.91 -2.79 -1.38 -4.2 0.18 0.9 -0.21 1.72 1.53 0.78 0.19 -0.35 -1.81 -1.5 -2.89 -0.35 0.8 -0.62 1.6 -0.36 -0.02 0.64
0.04 -0.09 -0.27 -0.26 0.17 0.12 -0.4 0.04 0.07 -0.03 -0.01 0.16 -0.4 0.66 -0.4 -0.61 -0.8 -0.2 0.14 -0.97 0.81 0.84 0.18 0.19 -0.74 -0.47 -0.88 0.11 -0.46 0.12 0.17 -0.11 0.06 0.32 0.59
-0.16 -0.48 -0.39 -0.53 -0.4 -0.18 -0.33 -0.16 -0.24 -0.19 0.73 0.68 -1.07 0.61 -1.94 -2.01 -3.36 -0.44 -0.13 -0.77 0.67 0.64 0.85 0.47 -0.23 -1.19 0.12 -0.48 0.35 0.64 0.34 0.72 0.6 -0.06 0.17
0.16 0.67 -0.15 0.66 -0.15 0.42 0.96 -0.16 0.66 0.76 -0.72 -0.45 0.03 -0.92 -0.91 -0.24 -3.43 0.05 0.55 -1.11 0.86 0.7 0.57 -1.39 -0.51 -1.69 -2.11 0.55 -0.3 -0.09 -0.36 0.03 -0.48 -0.96 0.45
0.26 0.13 -0.27 -0.14 -0.14 0.23 0.03 0.0 0.41 0.38 0.38 0.31 -0.71 -0.06 -1.55 -1.3 -2.93 -0.23 0.09 -1.23 0.88 0.93 -0.08 0.5 -0.64 -0.09 -0.0 0.31 -0.45 0.17 0.38 -0.63 0.44 -1.59 0.57
-1.29 -1.11 -1.04 -1.04 -1.1 -1.06 -0.84 0.11 -0.98 -0.76 1.07 -0.06 0.94 0.53 -2.4 -0.9 -3.9 0.31 -0.25 -0.24 0.66 1.28 0.43 0.68 -0.26 -0.59 -0.43 0.56 -0.02 0.69 0.23 0.69 -0.38 0.32 0.3
-0.73 -0.62 -0.79 -0.49 -0.42 -0.6 -0.44 -0.29 -0.44 -0.32 0.5 0.11 0.72 0.63 -0.31 0.53 -1.31 0.13 0.4 0.01 0.1 -0.22 -0.27 0.51 -0.65 -1.04 -1.11 0.28 0.05 0.37 -0.15 0.47 -0.26 0.56 1.18
-0.69 -0.86 -1.13 -0.91 0.09 -0.4 -0.81 -0.13 -0.39 -0.61 0.37 0.87 -1.05 0.2 -0.83 -1.47 -2.15 -0.64 -0.41 -0.3 0.27 1.17 1.47 0.47 -0.43 -0.58 0.04 -0.05 -0.4 0.76 0.97 0.23 0.62 0.16 -0.39
-0.19 -0.24 -0.17 -0.51 0.25 -0.37 -0.45 -0.28 -0.11 -0.01 -1.22 -0.99 -2.42 -1.4 -1.23 -0.71 -2.75 -0.43 -0.16 0.05 0.74 1.46 1.54 -0.12 -0.62 -2.37 -0.56 0.16 0.33 0.59 0.61 0.57 -1.14 -1.2 1.74
-0.5 -0.82 -0.65 -0.99 0.01 -0.86 -1.0 -0.27 -0.76 -0.62 -1.65 -1.39 -2.08 -1.57 -0.81 -0.15 -1.87 -0.36 -0.24 -0.22 1.46 2.01 1.91 -0.18 0.04 -2.88 -1.21 -0.64 0.16 0.79 0.96 0.73 -1.83 -1.8 1.19
-0.9 -0.49 -0.99 -0.51 0.25 -0.38 -0.49 -0.76 -0.15 -0.27 0.67 0.74 -1.03 1.26 -0.88 -1.26 -0.9 -0.24 0.09 -1.43 0.33 0.81 0.32 0.83 -0.13 -0.37 -0.29 -0.41 -0.77 0.63 0.89 -0.37 0.59 0.2 -0.13
-0.98 -0.11 -0.8 -0.01 -0.69 -0.4 0.42 -0.12 -0.18 -0.2 -0.34 -0.12 -0.23 1.09 -2.33 -1.91 -3.79 -0.25 0.32 -0.35 0.4 0.71 0.2 0.59 -0.12 -1.87 -0.12 -0.23 -0.52 0.87 0.79 0.76 -0.36 0.35 0.96
0.12 0.07 -0.18 -0.09 -0.11 0.37 0.06 -0.19 0.14 0.33 0.41 0.52 0.15 -0.04 -0.98 -1.01 -2.58 0.28 0.22 -0.68 0.44 0.87 0.68 -0.33 -1.19 -1.11 -1.19 0.28 -0.51 0.15 -0.05 0.4 0.64 -0.22 -0.22
-1.25 -0.63 -1.38 -0.64 -1.03 -0.63 -0.18 -0.6 -0.25 -0.23 0.66 0.77 -0.32 1.12 -1.1 -0.68 -1.9 -0.16 0.66 -0.98 -0.19 0.65 -0.21 0.14 -1.07 -1.24 -0.3 -0.31 -0.22 0.9 0.46 0.96 0.39 0.37 1.23
0.55 0.69 -0.03 0.72 0.23 0.58 0.64 0.04 0.63 0.66 -1.61 -1.34 -0.01 -1.44 -0.29 -0.11 -1.28 0.24 0.27 -0.47 0.63 0.99 -0.07 0.01 -1.1 -1.78 -1.7 0.32 -0.8 0.06 -0.15 0.05 -1.1 -0.18 -0.18
0.24 0.46 -0.0 0.36 -0.61 0.52 0.56 0.31 0.53 0.68 -0.44 -0.42 -0.93 0.72 -1.16 -1.08 -1.65 -0.12 0.05 -1.07 0.58 0.51 0.05 0.15 -1.07 -1.18 -0.67 -0.12 -0.18 0.4 0.55 0.09 -0.16 -0.12 -0.11
-2.07 -1.06 -2.08 -0.48 -1.11 -1.23 0.18 -1.4 -0.38 -0.95 -1.41 -1.65 0.38 0.76 -1.37 -1.05 -2.58 0.32 0.29 -0.07 1.32 0.5 1.58 0.34 0.72 -0.33 -0.26 -2.8 0.4 0.85 -0.22 1.57 -1.76 0.19 0.6
-0.46 -0.1 -0.41 0.14 -0.95 -0.34 0.26 -0.36 0.22 0.16 -0.33 0.11 0.57 -0.18 -0.95 -0.93 -2.29 -0.41 -0.05 0.12 1.29 1.2 0.71 -0.16 -1.43 -1.09 -1.25 -0.16 -0.23 0.45 0.04 0.73 -0.1 0.92 -1.11
-0.09 0.33 -0.39 0.34 -0.11 0.24 0.57 -0.25 0.45 0.55 -0.06 -0.29 -0.56 -1.08 -1.59 -0.72 -4.89 0.14 0.04 -0.49 0.8 0.7 0.58 -0.19 -1.1 -1.2 -0.82 1.05 -0.13 0.36 0.07 0.16 -0.18 -0.26 0.49
-0.3 -0.14 -0.37 -0.18 -0.13 -0.07 -0.25 -0.22 0.37 0.25 0.66 0.76 -0.66 -0.23 -1.32 -0.88 -2.94 -0.43 -0.23 -0.32 0.34 0.92 0.38 0.06 -1.05 -0.77 -0.34 -0.74 -0.75 0.71 0.54 0.2 0.71 0.26 0.78
-1.74 -1.46 -1.47 -0.75 -0.82 -1.69 -0.43 -0.21 -0.57 -0.36 -0.03 -0.43 -0.56 -0.4 -2.22 -2.45 -3.15 -0.08 -0.12 -0.08 1.05 0.99 1.25 0.99 0.66 -2.35 -1.88 -0.2 0.01 1.03 0.24 1.38 -0.77 0.37 1.54
-1.15 -0.68 -1.53 -1.11 -0.89 -0.4 -0.32 0.94 -1.68 -0.88 -0.52 -0.15 -1.99 1.54 -2.34 -0.97 -2.98 -0.3 -0.56 -1.41 1.98 2.75 -1.5 0.18 -1.43 -0.93 -0.99 -1.5 0.85 -0.32 -0.32 -0.19 -0.26 -1.57 0.49
0.1 0.71 -0.02 0.6 -0.47 0.28 0.44 1.0 0.46 0.7 -0.33 -0.2 -1.25 -0.07 -1.12 -0.76 -3.18 -0.11 0.55 -1.47 0.51 0.92 -0.92 -0.21 -1.98 -1.57 -2.16 -2.31 0.07 0.96 1.05 0.2 -0.16 0.39 -1.23
-0.11 -0.09 -0.37 -0.23 -0.05 -0.08 -0.04 0.08 -0.13 0.09 0.17 0.37 -0.75 0.53 -0.28 -0.8 -0.63 -0.12 -0.1 -0.44 0.64 0.52 0.67 0.32 0.47 -1.17 -1.26 0.93 -1.34 -0.08 0.23 -0.27 0.14 -0.42 0.42
-0.01 -0.06 -0.6 -0.03 -0.61 -0.01 0.33 -0.06 0.11 0.28 -0.1 0.33 -1.0 -0.09 -1.64 -1.39 -2.78 0.03 0.27 -0.07 0.88 0.73 0.48 -0.5 -1.08 -0.57 1.37 0.03 -0.7 0.07 -0.5 0.35 0.12 -0.27 0.74
-0.32 -0.14 -0.28 -0.13 -0.32 0.16 -0.05 0.22 0.1 0.25 -0.21 0.08 -0.57 0.29 -1.29 -1.27 -3.06 -0.3 -0.12 -1.01 1.21 1.05 0.1 0.35 -0.64 -0.88 -0.43 -0.31 0.21 0.57 0.33 0.74 -0.06 0.22 0.13
-0.17 -0.27 -0.71 -0.67 0.12 -0.11 -0.68 -0.26 -0.07 0.1 -0.5 -0.32 -0.88 -0.17 -1.87 -1.28 -3.4 0.19 0.15 -1.12 1.29 0.51 0.39 0.25 -0.27 -0.63 -0.24 0.49 0.24 0.83 0.79 0.45 -0.45 -0.36 1.3
0.02 0.23 -0.33 -0.06 -0.37 0.03 0.09 -0.22 0.02 0.28 0.07 0.32 -1.1 -0.05 -0.94 -0.62 -2.06 0.11 0.16 -0.89 0.66 0.65 0.58 0.13 -0.29 -1.38 -1.12 0.21 0.09 0.47 0.23 0.48 0.19 0.03 0.57
-0.75 -0.58 -1.04 -0.69 -1.02 -0.18 -0.52 -0.55 -0.13 -0.28 0.62 0.85 -1.04 1.48 -1.24 -1.14 -1.7 -0.31 -0.15 -1.11 -0.09 -0.66 -0.89 1.04 -0.19 -1.4 0.41 -0.89 -0.31 0.87 1.28 0.02 0.73 0.82 0.44
-0.26 0.29 -0.48 -0.09 -0.38 0.07 0.11 -0.33 0.06 0.14 0.41 0.56 0.13 0.76 -1.07 -0.56 -2.57 0.16 0.16 -0.23 -0.68 -0.28 -0.93 -0.72 -2.54 0.15 1.62 -0.03 -0.58 -0.67 -0.72 0.03 0.49 0.69 0.67
-0.67 -0.21 -0.74 -0.29 -0.41 -0.42 -0.41 -0.55 -0.3 -0.32 0.47 0.52 -0.45 1.23 -1.62 -1.81 -2.74 -0.22 -0.37 -1.14 1.13 1.15 0.78 0.9 -0.15 -0.6 -0.4 -0.74 -0.9 0.99 0.54 0.33 0.39 -1.23 -0.11
-0.57 0.42 -0.53 1.07 -0.18 -0.2 1.24 0.82 0.05 0.39 -1.69 -1.36 -3.51 -2.16 -1.32 -0.52 -1.91 0.19 1.18 -1.48 1.0 1.39 -0.64 0.84 -0.8 -2.14 0.16 -0.31 -1.39 0.76 0.16 1.05 -1.38 -4.45 -1.4
-0.64 0.32 -0.86 0.7 -0.82 -0.02 1.17 -0.1 0.16 0.37 -1.05 -0.97 -0.22 -1.36 -1.87 -1.45 -3.97 -0.2 0.74 -1.77 0.97 1.18 0.61 0.28 -0.4 -0.56 1.02 -1.36 -1.23 0.64 -0.01 0.85 -0.94 -0.98 0.45
-0.88 -0.14 -1.23 -0.08 -0.1 -0.64 0.45 -0.56 -0.31 -0.09 -0.43 -0.26 0.87 0.96 -1.85 -1.42 -3.85 0.16 0.21 -0.26 0.98 0.81 1.0 0.05 -0.14 -1.75 -1.99 0.05 0.5 0.55 -0.48 1.1 -0.43 -0.73 0.38
-0.78 -0.19 0.1 0.49 -1.03 -0.06 0.79 0.59 0.25 0.34 -0.81 -0.39 0.22 1.03 -1.95 -0.59 -2.53 -0.07 0.79 -0.33 0.25 0.23 -0.46 0.31 -1.12 -2.18 -1.93 -0.26 0.39 0.84 1.08 0.06 -0.56 -0.7 0.24
-0.12 0.53 -0.09 0.53 -0.21 0.34 0.56 0.13 0.5 0.59 0.35 0.45 -1.18 0.6 -1.78 -1.48 -1.93 -0.32 0.12 -0.79 0.08 0.87 -0.21 -0.27 -1.07 -1.45 -1.74 0.45 -0.09 0.23 0.35 -0.11 0.55 -0.54 0.14
-0.38 0.14 -0.46 0.05 -0.67 -0.22 -0.08 -0.73 0.1 0.03 -0.18 0.0 -0.75 0.57 0.3 -0.34 0.18 0.08 0.57 -0.25 0.91 1.29 0.68 0.34 -1.67 -0.95 -1.28 -0.22 -2.43 -0.75 -0.66 -1.4 -0.11 0.2 1.37
-0.22 0.38 -0.33 0.35 -0.72 0.0 0.43 -0.03 0.17 0.41 -0.23 0.07 -0.32 0.53 -1.72 -1.03 -3.22 -0.17 0.15 0.12 0.94 0.67 -0.03 0.45 -1.27 -1.43 -1.67 -0.2 0.11 0.94 0.67 0.44 -0.02 -0.57 -0.3
-0.83 -0.51 -0.57 -0.39 -0.73 -0.54 -0.09 -0.16 -0.56 -0.5 -0.93 -0.53 0.08 0.93 -1.28 -1.29 -3.61 0.07 0.29 -0.01 1.76 1.21 0.6 0.57 -1.74 -1.77 -0.27 -1.02 0.41 0.85 0.29 1.2 -0.73 -0.2 -0.52
0.05 0.02 -0.26 0.01 -0.17 -0.01 0.17 -0.07 0.0 -0.08 -0.01 0.26 -1.09 0.43 -0.72 -0.45 -3.14 0.19 0.3 -0.17 0.31 0.84 0.68 -0.03 -1.23 -1.49 -1.65 -0.01 -0.2 0.22 0.06 0.5 0.33 0.51 0.68
-0.39 -0.11 -0.57 -0.14 -0.37 -0.12 -0.26 -0.02 -0.07 -0.08 0.61 0.4 -0.38 0.31 -0.97 -0.32 -3.17 0.06 0.34 -1.13 0.74 0.78 0.74 -0.37 -1.03 -0.35 -1.13 0.26 -0.76 0.43 0.55 0.06 0.22 0.4 0.66
-0.67 -0.58 -0.83 -0.79 -0.23 -0.22 -0.59 -0.26 -0.28 -0.25 -0.49 -0.15 -1.12 1.19 -0.15 -0.65 -1.97 0.17 0.49 -1.12 1.07 1.13 0.58 0.57 -0.6 -1.36 -1.5 -0.07 -0.1 -0.1 -0.28 0.09 -0.48 0.1 1.76
-1.33 -0.31 -0.96 0.13 -0.75 -0.65 0.3 -0.04 -0.27 -0.29 0.06 0.32 -1.2 0.98 -1.8 -1.28 -1.89 -0.38 0.13 -0.27 0.89 0.81 0.49 0.05 -0.6 -1.9 -1.53 -1.26 0.57 0.7 -0.03 1.21 0.26 0.18 1.2
-0.42 0.07 -0.31 0.2 -0.71 -0.37 0.24 0.05 0.03 0.05 0.0 0.38 -0.14 0.8 -0.94 -1.1 -1.58 -0.25 0.43 -0.0 0.65 1.0 0.17 -0.02 -0.97 -0.81 -1.1 0.02 -0.1 0.25 0.07 0.34 0.28 0.13 0.2
-0.45 0.13 -0.26 0.27 -0.55 0.01 0.4 0.06 0.28 0.47 -0.05 0.27 -0.78 -0.11 -1.01 -0.86 -2.31 0.15 0.46 0.15 0.85 1.14 0.26 0.36 -0.84 -1.15 -1.46 0.03 -0.23 0.23 -0.19 0.28 0.32 -0.36 -0.11
-0.98 -0.11 -0.8 -0.01 -0.69 -0.4 0.42 -0.12 -0.18 -0.2 -0.34 -0.12 -0.23 1.09 -2.33 -1.91 -3.79 -0.25 0.32 -0.35 0.4 0.71 0.2 0.59 -0.12 -1.87 -0.12 -0.23 -0.52 0.87 0.79 0.76 -0.36 0.35 0.96
-0.9 -0.49 -0.99 -0.51 0.25 -0.38 -0.49 -0.76 -0.15 -0.27 0.67 0.74 -1.03 1.26 -0.88 -1.26 -0.9 -0.24 0.09 -1.43 0.33 0.81 0.32 0.83 -0.13 -0.37 -0.29 -0.41 -0.77 0.63 0.89 -0.37 0.59 0.2 -0.13
-1.3 -0.86 -1.17 -0.46 -0.51 -0.42 -0.06 -0.15 0.01 -0.02 -0.56 -0.53 -0.32 0.9 -1.46 -0.88 -2.85 0.16 0.11 -0.4 0.79 0.82 0.28 0.91 0.64 -1.08 -0.81 -0.99 0.58 0.38 -0.12 0.79 -0.62 -0.14 1.5
-1.28 -0.61 -1.13 -0.12 -0.63 -0.64 0.23 -0.78 -0.22 -0.26 -0.39 -0.63 -0.65 0.04 -1.45 -0.54 -2.09 -0.01 0.41 -0.14 0.82 0.15 0.86 0.52 0.94 -0.91 -0.72 -0.22 0.64 0.79 0.31 1.13 -0.54 -0.38 1.0

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.