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  5. PTI_12G00160.1

PTI_12G00160.1


Description : Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation, RCC1; Glutathione-specific gamma-glutamylcyclotransferase [Interproscan].


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: PTI_12G00160.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001339.20 tig00001339_g8275.t1 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00021318.63 tig00021318_g20183.t1 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre02.g089274 30785097 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre05.g243353 30782974 No description available 0.01 OrthoFinder
Cre12.g498450 30792845 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz07g00140.t1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Cz14g02070.t1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Dusal.0193s00014.1 33196100 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
EOD10197 No alias E3 ubiquitin ligase [Ensembl]. 0.02 OrthoFinder
EOD23616 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
OT_16G02830.1 No alias Regulator of chromosome condensation (RCC1) repeat;... 0.01 OrthoFinder
Sro289_g109030.1 Contig4471.g33587 RCC1 and BTB domain-containing protein 2 0.03 OrthoFinder
TP03G07260.1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_2579 2579 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder
XM_002506241.1 MICPUN_64303, 64303 Regulator of chromosome condensation, RCC1; Ankyrin... 0.02 OrthoFinder
XM_002506580.1 MICPUN_64626, 64626 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000645.1_cds_GFH13724.1_8201 HaLaN_09662, GFH13724 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000950.1_cds_GFH16129.1_10606 HaLaN_12494, GFH16129 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000025.1_cds_PRW20195.1_5746 PRW20195 RCC2-like protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEA Interproscan
BP GO:0006751 glutathione catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005956 protein kinase CK2 complex IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 469 520
IPR000408 Reg_chr_condens 532 575
IPR000408 Reg_chr_condens 579 601
IPR006840 ChaC 41 219
No external refs found!