1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_11G01560.1

PTI_11G01560.1


Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0004811 (OrthoFinder) Phylogenetic Tree(s): OG0004811_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_11G01560.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Cre03.g158950 30787699 RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder
Vocar.0019s0108.1 32892754 RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP Enrichment
MF GO:0003756 protein disulfide isomerase activity IEP Enrichment
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Enrichment
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP Enrichment
MF GO:0004615 phosphomannomutase activity IEP Enrichment
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006481 C-terminal protein methylation IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Enrichment
BP GO:0009225 nucleotide-sugar metabolic process IEP Enrichment
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Enrichment
BP GO:0009298 GDP-mannose biosynthetic process IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0010340 carboxyl-O-methyltransferase activity IEP Enrichment
MF GO:0016289 CoA hydrolase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
BP GO:0018410 C-terminal protein amino acid modification IEP Enrichment
BP GO:0019673 GDP-mannose metabolic process IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
CC GO:0030008 TRAPP complex IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0043687 post-translational protein modification IEP Enrichment
BP GO:0044550 secondary metabolite biosynthetic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0046937 phytochelatin metabolic process IEP Enrichment
BP GO:0046938 phytochelatin biosynthetic process IEP Enrichment
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP Enrichment
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 22 89
No external refs found!