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  5. PTI_11G00330.1

PTI_11G00330.1


Description : BEACH domain; PH-BEACH domain; WD40 repeat [Interproscan].


Gene families : OG_01_0000641 (OrthoFinder) Phylogenetic Tree(s): OG0000641_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_11G00330.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Cre06.g274950 30778828 BEACH domain-containing protein A2 OS=Arabidopsis thaliana 0.01 OrthoFinder
EOD19568 No alias BEACH domain [Interproscan]. 0.04 OrthoFinder
EOD31744 No alias BEACH domain [Interproscan]. 0.03 OrthoFinder
OT_04G03470.1 No alias PH-BEACH domain; Domain of unknown function DUF4704;... 0.04 OrthoFinder
OT_06G01490.1 No alias PH-BEACH domain; BEACH domain [Interproscan]. 0.04 OrthoFinder
Sro1247_g255870.1 Contig2843.g22827 Lipopolysaccharide-responsive and beige-like anchor protein 0.07 OrthoFinder
Sro1247_g255870.3 No alias BEACH domain; PH-BEACH domain [Interproscan]. 0.07 OrthoFinder
Sro1730_g294110.1 Contig2449.g20048 Lipopolysaccharide-responsive and beige-like anchor protein 0.06 OrthoFinder
Sro436_g142590.1 Contig228.g2747 Lipopolysaccharide-responsive and beige-like anchor protein 0.02 OrthoFinder
Sro639_g179700.1 Contig197.g2291 Lipopolysaccharide-responsive and beige-like anchor protein 0.21 OrthoFinder
TP13G00130.1 No alias BEACH domain [Interproscan]. 0.02 OrthoFinder
TP14G02620.1 No alias BEACH domain [Interproscan]. 0.03 OrthoFinder
XM_002503222.1 MICPUN_82791, 82791 BEACH domain; WD40 repeat; PH-BEACH domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
CC GO:0071203 WASH complex IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 3303 3327
IPR023362 PH-BEACH_dom 2797 2866
IPR000409 BEACH_dom 2900 3181
No external refs found!