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  5. PTI_10G03770.1

PTI_10G03770.1


Description : AAA ATPase, AAA+ lid domain; CDC48, N-terminal subdomain; ATPase, AAA-type, core [Interproscan].


Gene families : OG_01_0000083 (OrthoFinder) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_10G03770.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021463.11 tig00021463_g21619.t1 Cell division control protein 48 homolog A... 0.02 OrthoFinder
Dusal.0008s00033.1 33198881 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.02 OrthoFinder
Dusal.0191s00006.1 33186464 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.02 OrthoFinder
EOD23160 No alias Cell division cycle protein 48 [Ensembl]. 0.02 OrthoFinder
EOD26464 No alias Cell division cycle protein 48 [Ensembl]. 0.01 OrthoFinder
OT_01G03790.1 No alias AAA ATPase, AAA+ lid domain; Vps4 oligomerisation,... 0.02 OrthoFinder
Sro98_g050450.1 Contig3362.g26337 Transitional endoplasmic reticulum ATPase 0.02 OrthoFinder
TP04G04850.1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.04 OrthoFinder
TP05G03870.1 No alias ATPase, AAA-type, core; CDC48, domain 2; AAA ATPase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003338 CDC4_N-term_subdom 138 225
IPR003959 ATPase_AAA_core 368 500
IPR003959 ATPase_AAA_core 645 778
IPR041569 AAA_lid_3 800 836
IPR041569 AAA_lid_3 524 562
No external refs found!