Heatmap: Cluster_58 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
0.83 -0.53 0.01 -1.1 -0.56 0.29 -1.24 -0.16 -0.22 -0.59 -2.08 -1.9 -1.99 -3.04 1.47 0.19 0.96 -0.52 0.31 -2.36 -1.04 -1.21 -3.06 1.27 -0.3 0.26 0.32 0.14 -1.1 1.0 1.36 0.07 -1.54 -0.04 1.17
-0.34 -1.11 -1.21 -2.25 -0.76 -0.58 -1.92 -1.13 -0.72 -0.76 0.88 0.41 -2.47 -1.35 -0.41 -1.48 0.9 -2.34 -0.83 -2.73 -3.83 -2.47 -4.56 1.58 -0.56 -0.14 0.25 -0.37 -1.01 1.11 1.61 -0.78 0.51 1.29 2.41
-0.58 -0.95 -1.3 -1.22 -0.61 -0.28 -0.71 -0.49 -0.34 -0.74 -1.44 -2.07 -0.75 -2.83 0.26 -0.02 0.17 -0.71 0.35 -0.62 -0.33 -0.01 -1.45 1.53 0.76 0.13 1.0 -0.08 -0.8 1.28 1.96 0.01 -1.68 -1.09 1.1
0.03 0.32 0.31 0.05 -0.62 0.12 -0.21 0.17 -0.35 0.12 -1.23 -1.36 -1.11 -0.84 0.74 0.05 -0.35 -0.12 0.13 -0.61 -0.9 -0.14 -1.82 1.72 0.22 0.02 0.22 -1.12 -0.94 0.99 1.04 0.11 -1.1 -0.27 0.1
0.2 -1.17 -0.69 -1.87 -0.81 -0.28 -1.72 -0.26 -0.69 -0.85 -1.07 -0.95 -1.36 -1.69 0.23 -0.78 0.2 -1.14 -0.49 -1.52 0.77 0.69 -0.53 2.07 0.5 -1.13 -1.02 -0.23 -0.9 1.46 1.83 0.54 -0.83 0.24 0.26
-0.96 -1.62 -1.53 -2.08 -0.72 -0.87 -1.89 -1.09 -0.93 -1.14 -1.23 -1.43 -1.41 -1.8 -0.33 -1.03 0.65 -1.21 -0.02 -0.78 0.65 0.35 -0.39 1.81 0.58 -1.37 -0.91 -0.63 -1.83 0.95 1.0 -0.0 -1.1 -0.76 2.99
-0.37 -1.17 -1.33 -1.37 -1.0 -0.07 -0.74 0.15 -0.36 -0.43 0.14 -0.74 -2.65 -1.44 -0.38 -0.39 -1.26 -0.47 0.45 -1.48 -1.01 -0.05 -1.82 1.79 0.01 -3.29 -2.65 -0.67 -0.67 1.5 1.79 0.19 -0.5 0.13 2.24
0.02 0.57 1.47 1.49 -1.47 0.01 -0.72 0.86 -1.01 -0.27 -1.94 -1.24 - -1.34 -2.37 -1.88 -3.21 -0.58 0.37 -1.17 -0.7 0.03 -4.62 2.45 -2.78 -0.42 -1.16 -1.38 -0.51 1.27 0.51 0.93 -0.94 0.19 -0.35
0.07 0.16 -0.36 -0.04 -0.38 0.02 -0.05 -0.73 0.01 0.11 -0.47 -0.3 -1.23 -1.22 -1.35 -1.3 -3.09 -0.31 -0.05 -1.87 0.12 0.41 -0.87 1.59 -2.37 -1.11 -1.46 0.46 -1.27 0.05 -0.63 0.28 -0.23 0.06 2.75
-1.3 -1.16 -1.38 -1.15 -1.22 -1.45 -1.4 -1.81 -1.42 -1.26 -1.07 -0.74 -1.5 -0.82 -1.45 -1.58 -3.52 -0.47 0.15 -2.5 -0.82 0.59 -1.91 1.43 -2.97 -2.24 -1.84 -0.4 -2.41 -0.12 -1.15 0.1 -0.9 -0.17 3.98
0.28 -1.24 -0.69 -1.97 -0.82 -0.02 -1.8 -0.33 -0.52 -0.68 0.04 -0.71 -1.65 -2.94 0.13 -0.15 -1.51 -0.67 0.31 -1.91 -0.38 -0.12 -1.66 1.33 0.26 0.49 1.33 -0.39 -0.8 1.37 1.85 0.09 -0.21 -0.42 1.08
-0.37 -0.19 -0.55 -0.37 -0.59 -0.25 -0.39 -0.45 -0.15 -0.0 -1.44 -1.37 -2.1 -1.5 0.52 0.24 0.77 0.05 0.65 -1.31 1.0 0.62 -0.3 1.49 -0.55 -0.05 -0.51 0.24 -1.26 0.68 1.25 -0.6 -1.03 -0.21 0.28
0.35 -0.57 -0.15 -0.97 -0.77 0.39 -0.94 -0.56 -0.23 -0.27 -1.74 -2.23 -1.98 -3.81 1.63 0.09 1.06 -0.39 0.27 -1.74 0.02 -0.71 -1.26 1.71 -0.13 1.19 0.94 -1.03 -2.0 0.91 1.42 -0.81 -1.08 -1.24 -1.57
0.18 -0.95 -0.62 -1.77 -0.38 -0.07 -1.66 -0.64 -0.41 -0.66 -0.63 -0.78 -0.96 -2.45 -0.15 -0.65 -0.82 -0.94 -0.82 -0.66 0.17 0.26 -1.06 1.21 0.66 0.44 1.02 0.03 -0.43 1.09 1.15 0.56 -0.36 0.1 1.61
-0.76 -1.81 -0.96 -2.25 -1.65 -1.12 -2.13 -1.06 -1.82 -1.7 -2.1 -2.12 -2.66 -2.19 0.73 -0.32 1.67 -1.5 0.7 -0.95 -0.04 0.05 -2.46 2.4 0.32 -1.03 -0.24 -2.92 -1.15 1.32 1.68 0.16 -1.97 0.51 1.68
0.26 -0.22 -0.74 -0.48 -0.91 0.19 0.11 -0.75 -0.07 -0.25 -0.85 -0.53 -0.82 -2.41 0.51 -0.14 -0.72 -0.13 0.11 -1.02 -0.18 0.0 -1.17 1.81 -0.2 -0.58 -1.13 -0.0 -1.63 1.03 0.74 1.02 -0.03 0.13 1.06
0.0 -0.28 -0.65 -0.55 -0.57 0.15 -0.28 -0.85 0.17 -0.02 0.39 -0.01 -0.9 -1.53 -0.5 -0.66 -1.39 -0.19 0.74 -1.41 -1.13 -0.64 -1.34 1.72 -0.6 -0.5 0.14 0.23 -0.92 0.0 0.88 -0.63 0.23 0.96 1.67
0.21 -0.97 -0.65 -1.76 -0.05 0.18 -1.9 -0.52 0.07 -0.32 -0.6 -1.13 -1.09 -2.61 0.39 -0.5 -0.77 -0.74 0.14 -2.01 0.27 0.37 -0.8 2.13 -0.92 -0.05 -0.02 -0.87 -1.93 1.14 1.25 0.0 -0.82 0.94 1.25
0.29 -0.22 -0.17 -0.41 -0.2 0.46 -0.06 0.09 0.52 0.32 -1.02 -1.06 -0.64 -1.15 -0.83 -0.55 -1.12 -0.63 -0.2 -1.04 -0.0 -0.23 -0.53 1.49 -0.13 -0.33 -0.03 0.29 -0.38 1.15 1.44 0.15 -0.59 -0.88 0.35
-0.27 -1.22 -0.89 -1.44 -0.56 -0.36 -1.32 -0.62 -0.73 -0.87 -1.71 -1.94 -0.59 -1.25 0.25 -0.84 0.34 -1.17 -0.11 -1.75 -0.07 -0.22 -1.15 1.72 0.66 0.3 1.23 -0.6 -0.56 1.35 1.54 0.06 -1.35 -0.22 1.6
-0.11 -1.11 -0.68 -1.53 -0.28 -0.17 -1.32 -0.54 -0.2 -0.65 -1.5 -1.84 -0.99 -2.31 -0.35 -0.98 -1.99 -0.53 0.61 -1.99 0.27 0.27 -0.45 1.42 0.24 -0.35 1.07 -1.4 -0.86 0.87 1.04 0.39 -1.48 -0.0 2.49
1.03 0.05 0.5 -0.41 -1.25 0.73 -0.72 0.26 0.33 0.43 -1.1 -1.17 -1.8 -3.52 1.18 0.79 0.41 0.09 0.42 -1.01 -0.84 -0.71 -2.18 0.98 -0.99 0.29 0.19 -0.74 -1.14 0.63 1.21 -0.61 -0.41 -0.34 -1.25
-1.92 -1.45 -2.01 -1.39 -0.8 -1.68 -1.35 -0.98 -1.2 -1.33 -1.81 -1.53 0.56 -0.72 -1.9 -2.27 -2.34 -1.49 -0.95 -0.29 -0.32 -0.25 -1.47 0.32 0.38 0.18 1.47 0.12 0.21 1.06 0.87 0.68 -1.67 0.05 3.09
0.15 -1.02 -0.78 -1.76 -0.3 -0.06 -1.79 -0.45 -0.43 -0.7 0.44 -0.76 -1.12 -3.91 0.99 -0.2 1.16 -0.38 0.61 -1.29 -1.15 -0.55 -1.82 1.37 -0.11 -0.17 0.48 0.49 -0.37 0.81 1.09 -0.14 -0.94 0.73 0.8
0.21 -0.56 -0.5 -1.0 -0.6 0.07 -0.92 -0.42 -0.19 -0.28 -0.32 -0.75 -1.35 -2.04 0.39 -0.12 -0.58 -0.11 0.53 -0.55 0.09 0.17 -1.36 1.67 -0.41 -0.49 -0.82 -1.06 -1.49 0.95 1.31 -0.18 -0.28 0.17 1.77
-0.07 -0.07 -0.32 -0.55 -0.57 -0.22 -0.66 -0.3 -0.38 -0.24 -0.24 -0.2 -0.83 -0.75 -0.52 -0.55 0.28 -0.5 -0.11 -0.68 0.72 1.01 -0.08 1.16 -0.7 -0.37 -0.04 -0.52 -0.32 0.81 0.93 0.03 -0.21 0.14 0.96
-0.11 -1.14 -0.31 -0.8 -0.6 -0.39 -0.88 -0.78 -0.26 -0.8 -1.5 -1.57 -0.68 -2.18 0.27 -0.27 0.9 -0.2 -0.43 -0.26 0.56 0.32 -0.18 1.96 0.81 -1.33 -1.2 0.06 -0.37 1.13 1.3 0.32 -1.51 0.24 0.12
-0.16 -0.57 -0.6 -0.63 -0.31 -0.08 -0.31 -0.43 0.09 0.05 0.07 -0.18 -0.61 -1.48 -1.01 -1.12 -1.1 -1.62 -0.57 -1.25 -1.15 -0.06 -1.87 1.2 -0.51 0.48 0.69 -0.05 -0.31 1.38 1.54 0.43 0.02 0.02 1.36
0.12 -0.61 -0.48 -0.98 -0.51 -0.03 -0.81 -0.51 -0.21 -0.41 -1.32 -1.63 -0.32 -1.71 0.74 -0.33 1.42 -0.24 0.51 -0.61 0.11 -0.24 -0.97 1.25 0.38 0.04 0.1 -0.6 -1.29 0.76 1.14 -0.25 -1.39 -0.15 1.17
0.54 -0.03 -0.11 -0.19 -0.88 0.46 -0.03 -0.43 0.43 0.38 0.26 0.06 -1.22 -1.97 -0.33 -0.59 -0.44 -0.88 0.02 -1.31 0.26 0.13 -0.73 0.79 -0.46 -0.97 -1.13 0.1 -1.63 0.46 0.4 -0.41 0.51 0.51 1.76
0.87 1.44 0.16 0.66 -0.68 0.71 0.48 -0.54 -0.55 1.06 -0.26 -0.26 -1.63 -1.6 -1.7 -2.27 -1.73 0.14 0.18 -2.3 -3.58 -1.11 -4.41 2.33 -2.86 -0.46 -0.76 -2.41 -0.35 0.37 0.0 0.15 0.22 0.96 -1.01
0.43 -1.69 -0.66 -2.51 -0.99 -0.08 -2.56 -0.62 -0.62 -1.07 -2.33 -2.7 -0.89 -3.87 0.66 -0.55 0.93 -0.56 1.58 -1.97 -0.64 -0.56 -2.41 2.15 -0.05 -0.2 -0.19 0.13 -1.15 0.9 1.23 -0.1 -1.87 -0.51 1.91
-1.1 -1.27 -1.73 -1.66 -1.31 -1.24 -1.58 -0.79 -1.26 -1.47 -1.01 -1.61 -0.36 -2.67 -1.16 -1.44 -2.74 -1.54 -0.9 -1.39 -1.05 -0.6 -2.62 1.52 0.6 0.79 2.15 0.03 0.5 1.1 1.73 -0.67 -1.5 0.04 2.39
0.6 -1.14 -0.39 -2.42 -0.25 0.44 -2.32 -0.47 -0.19 -0.42 -0.71 -1.1 -1.1 -3.62 0.85 -0.13 0.29 -0.84 0.28 -1.76 -0.14 -0.18 -1.65 1.53 0.48 0.84 0.92 -0.12 -1.31 1.03 1.4 0.28 -0.44 -0.31 -0.19
0.22 -1.29 -0.54 -2.2 -0.49 0.07 -2.48 -0.29 -0.69 -0.93 -1.12 -1.08 -0.47 -3.69 0.71 -0.19 0.35 -1.05 0.19 -1.22 -0.28 -0.01 -1.39 1.65 0.51 0.05 0.13 -0.42 -0.92 1.37 1.61 0.16 -0.68 0.6 0.98
0.54 -0.16 0.23 -0.67 -1.24 -0.18 -1.15 0.21 -1.01 -0.89 -1.07 -1.35 -0.48 -2.4 0.13 -0.52 -1.02 -0.35 0.29 -1.39 -1.04 -0.69 -2.42 1.58 -0.0 0.59 0.67 -1.02 -0.18 1.26 1.57 0.39 -1.27 0.78 0.93
-1.17 -1.49 -1.76 -1.67 -1.54 -1.18 -1.12 -1.18 -1.1 -1.21 -0.41 -0.1 0.64 -0.0 -0.63 -0.62 -1.05 -0.97 0.14 -0.62 -0.47 -0.52 -1.35 1.72 0.72 -0.01 0.12 -0.88 0.01 1.27 1.65 0.28 -0.14 -0.93 2.06
1.15 -0.16 0.77 -0.3 -0.44 0.95 -0.42 0.04 0.37 0.17 -1.87 -1.97 -1.33 -3.51 0.87 -0.13 -0.62 0.23 0.36 -1.35 0.53 0.01 -0.4 1.08 -0.67 -0.51 -0.46 -1.31 -1.52 0.96 1.18 0.22 -1.07 -0.05 -1.68
0.56 -0.8 -0.24 -1.38 -0.76 0.07 -1.41 -0.51 -0.37 -0.68 -1.15 -1.89 -2.31 -3.85 0.9 -0.32 -0.77 -0.62 -0.23 -1.9 0.58 0.42 -1.83 1.98 -0.24 -1.36 -1.1 -0.48 -1.6 1.49 1.85 0.64 -1.26 0.78 0.75
-0.39 -0.56 -0.7 -0.57 -0.86 -0.4 -0.47 -0.28 -0.08 -0.36 -0.95 -0.77 -0.9 -0.56 -1.67 -1.07 -1.93 -0.53 0.17 -1.99 -0.54 0.23 -1.43 0.88 -1.4 -2.31 -0.08 0.4 -0.53 0.79 0.81 0.39 -0.75 0.06 3.04
-0.68 -1.01 -1.08 -1.03 -0.66 -0.66 -0.78 -0.67 -0.74 -0.71 0.12 0.27 -0.4 0.57 -1.06 -1.16 -0.94 -0.69 0.12 -0.16 -3.94 -1.65 -3.75 1.31 0.3 0.6 1.14 -1.15 -0.47 1.32 1.69 0.69 0.45 0.71 0.32
-0.41 -0.42 -0.58 -0.47 -0.65 -0.44 -0.29 -0.12 -0.2 -0.25 -0.19 -0.33 -1.77 -0.53 -1.15 -1.3 -1.36 -0.99 -0.33 -0.83 -3.14 -1.79 -3.72 0.92 -0.11 1.38 1.52 -0.09 -0.81 1.38 1.72 -0.4 0.06 -0.5 1.5
-0.06 -0.6 -0.65 -0.98 -1.5 -0.27 -0.61 -0.29 -0.3 -0.49 -1.25 -1.18 -1.58 -2.65 -0.79 -0.95 -0.3 -0.91 0.79 -2.0 -4.43 -2.42 -6.26 1.14 -1.12 -0.89 0.09 0.05 -0.25 1.77 2.14 0.18 -0.54 0.5 2.28
-0.49 -1.06 -0.89 -1.23 -0.57 -0.5 -1.1 -0.65 -0.62 -0.79 -1.95 -2.3 -0.35 -2.66 0.21 -0.7 1.28 -0.87 0.56 -1.06 -1.51 -1.38 -2.84 1.76 0.39 0.08 -0.03 0.04 -0.22 0.75 1.15 -0.06 -1.79 -0.25 2.47
0.4 -0.14 -0.23 -0.49 -0.57 0.04 -0.44 -0.16 -0.12 -0.08 -10.59 -11.41 0.36 -10.92 0.43 -0.09 -0.13 -0.82 0.05 -1.14 0.07 0.27 -1.29 2.2 0.64 0.08 -0.25 -0.21 -0.51 1.25 1.71 0.61 -10.48 - -
0.38 -0.01 -0.28 -0.32 -0.72 0.11 -0.12 -0.52 -0.2 -0.07 -0.45 -0.25 -0.79 -1.19 0.32 -0.6 0.01 -0.92 -0.36 -1.74 -0.31 -0.08 -1.62 1.78 0.16 -2.73 -3.64 0.2 -0.95 1.0 1.51 -0.18 -0.01 0.53 1.11
-0.09 -1.56 -1.09 -2.2 -1.5 -0.36 -2.11 -1.29 -0.69 -1.11 -1.24 -1.54 -0.84 -3.03 -0.08 -0.51 -0.39 -1.37 0.72 -1.46 -1.6 -0.64 -3.9 1.78 -0.59 -1.61 -1.13 -0.64 -1.03 1.74 2.31 0.37 -0.71 0.35 2.43
1.08 -0.54 0.75 -0.69 -1.74 -0.25 -1.92 -0.7 -0.99 -0.75 -2.74 -2.74 -1.72 -3.19 0.77 0.32 0.6 -1.18 -0.46 -0.82 -0.65 -0.82 -2.71 1.36 -0.71 0.98 0.91 -0.19 0.4 1.45 1.59 0.39 -1.63 0.59 -1.35
-1.11 -0.99 -0.99 -0.99 -0.62 -0.65 -0.75 -0.38 -0.28 -0.39 -0.69 -0.72 -0.83 -0.74 -0.69 -0.84 -0.12 -0.85 0.19 -0.96 -0.2 0.7 -0.92 2.09 0.11 -0.32 -0.26 -0.7 -0.9 1.04 0.97 0.22 -0.64 0.24 1.97
-0.59 -0.67 -0.92 -0.75 -0.67 -0.59 -0.82 -1.01 -0.41 -0.54 -1.28 -1.19 -0.73 -0.27 -0.5 -0.42 -1.39 -0.06 0.8 -0.93 0.51 0.21 0.29 1.24 -0.35 -1.52 -1.33 -0.59 -0.95 0.21 0.2 -0.19 -0.96 0.25 2.94
-0.19 -1.69 -1.12 -2.4 -0.33 -0.03 -1.5 -0.83 -0.39 -0.65 -1.24 -1.33 -1.41 -1.55 0.62 0.14 1.45 -0.91 0.34 -1.0 -2.37 -0.73 -2.82 2.18 0.71 -0.15 0.1 -1.52 -0.54 1.49 1.74 0.31 -1.12 -0.27 0.12
0.25 0.05 -0.22 -0.54 -0.45 0.21 -0.38 0.19 -0.32 -0.25 -0.84 -0.92 -1.07 -1.24 0.63 -0.59 1.67 -0.13 0.57 -1.65 -0.97 -0.41 -1.95 1.72 -1.99 0.2 -0.59 -3.91 -1.61 1.1 1.16 -0.11 -0.69 0.98 -0.92
0.34 -0.18 -0.12 -0.31 -0.84 0.05 -0.28 0.84 -0.46 -0.46 -0.94 -0.79 -0.56 -1.65 0.36 -0.1 -0.91 0.44 0.46 -0.68 -0.82 -0.6 -1.56 0.63 -0.38 -0.6 0.21 0.12 -0.31 1.01 0.98 0.7 -0.85 0.66 0.95
0.05 0.04 -0.53 -0.35 -1.26 0.18 -0.32 -0.25 0.02 0.2 0.01 0.18 -1.27 -0.5 -0.08 -0.15 -0.4 -0.06 0.53 -1.87 -0.08 0.57 -1.04 0.64 -1.09 -1.07 -1.34 0.13 -1.73 1.1 1.23 0.4 0.29 0.07 1.19
0.26 -0.55 -0.49 -0.93 -0.96 -0.09 -0.88 -0.39 -0.13 -0.22 0.2 0.29 -1.05 -0.98 -0.81 -0.5 -2.72 -0.21 0.49 -1.38 0.42 0.28 -0.67 1.15 0.03 -1.31 -1.41 0.4 -0.5 0.9 1.3 -0.11 0.47 0.06 1.6
-0.34 -0.93 -0.53 -1.02 -0.75 -0.4 -0.84 0.19 -0.54 -0.48 -1.86 -1.81 -0.04 -0.65 -0.31 -1.81 -0.1 -0.48 0.75 -0.68 1.04 0.57 -0.42 2.02 -0.38 0.47 0.3 -1.76 -1.05 0.81 0.51 0.49 -1.76 0.45 1.06
0.03 -0.35 -0.17 -0.46 -0.16 -0.08 -0.44 -0.39 0.04 -0.11 -1.05 -0.86 0.82 -1.41 0.48 -0.06 0.02 0.07 0.56 -0.55 -2.03 -1.0 -2.33 0.27 -1.56 0.35 0.64 0.23 -1.03 0.56 0.56 -0.14 -0.81 1.18 1.51
-0.05 -1.04 -0.31 -1.35 -0.2 0.13 -1.08 -0.72 0.15 0.08 -0.42 -1.97 -2.23 -1.48 0.82 -0.05 0.08 -0.69 -0.31 -1.94 1.18 0.75 0.81 1.39 0.67 -0.56 0.14 -1.42 -1.32 0.96 1.3 -0.23 -1.21 -0.44 0.25
0.25 -1.31 -0.36 -2.01 -1.01 0.26 -1.94 -0.03 -0.41 -0.64 -0.23 -0.96 -0.51 -3.1 1.13 -0.02 -0.09 -0.09 0.71 -1.75 -0.64 -0.11 -1.73 1.75 -0.37 0.3 0.7 -1.85 -1.31 1.41 1.65 0.37 -0.78 0.09 -0.81
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.