PTI_10G02550.1

Description : RNA recognition motif domain [Interproscan].

Gene families : OG_01_0001782 (OrthoFinder) Phylogenetic Tree(s): OG0001782_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: PTI_10G02550.1
Cluster	HCCA: Cluster_87

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cz06g09180.t1	No alias	Splicing factor RBM39, linker; RNA recognition motif...	0.02	OrthoFinder
Transcript_contig_89393	89393	RNA recognition motif domain [Interproscan].	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0004252	serine-type endopeptidase activity	IEP	Enrichment
BP	GO:0006486	protein glycosylation	IEP	Enrichment
MF	GO:0008236	serine-type peptidase activity	IEP	Enrichment
MF	GO:0017171	serine hydrolase activity	IEP	Enrichment
BP	GO:0019538	protein metabolic process	IEP	Enrichment
BP	GO:0043413	macromolecule glycosylation	IEP	Enrichment
BP	GO:0070085	glycosylation	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	311	368
IPR000504	RRM_dom	429	498

External Links

No external refs found!