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  5. PTI_10G01970.1

PTI_10G01970.1


Description : Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0001829 (OrthoFinder) Phylogenetic Tree(s): OG0001829_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_10G01970.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
EOD20891 No alias Helicase, C-terminal [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold2924.8 2924.8 Helicase, C-terminal [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01005208.1_cds_GFH30877.1_25354 HaLaN_29806, GFH30877 Helicase, C-terminal [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004340 glucokinase activity IEP Enrichment
MF GO:0004396 hexokinase activity IEP Enrichment
MF GO:0005536 glucose binding IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
BP GO:0019236 response to pheromone IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 525 628
IPR011545 DEAD/DEAH_box_helicase_dom 281 480
No external refs found!