1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_09G04160.1

PTI_09G04160.1


Description : High mobility group box domain [Interproscan].


Gene families : OG_01_0000118 (OrthoFinder) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_09G04160.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Sro2137_g316050.1 Contig702.g8144 Group protein B1 0.04 OrthoFinder
TP12G00490.1 No alias High mobility group box domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004806 triglyceride lipase activity IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 212 279
IPR009071 HMG_box_dom 113 180
IPR009071 HMG_box_dom 12 79
No external refs found!