Heatmap: Cluster_61 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
0.9 1.59 1.12 0.76 0.54 1.14 0.96 -1.16 0.91 1.52 -16.35 -5.98 0.24 -10.33 -1.32 -0.38 -0.37 0.1 0.73 -0.04 -0.71 1.85 -0.55 -1.37 -18.23 -0.21 -3.12 0.15 -0.74 -2.54 -1.19 -9.56 - -4.7 -12.27
0.94 0.01 0.43 0.55 -0.28 1.43 0.15 1.29 0.17 0.7 - - - - - -4.61 -6.18 -4.96 1.14 -2.95 -5.32 -3.54 -2.94 3.82 -6.32 - - 0.47 0.23 -6.17 -5.54 -4.88 - - -
-0.97 -0.5 -1.29 -0.62 0.33 -0.71 -0.43 -1.71 -0.19 -0.51 -0.96 -1.1 -0.15 -0.18 0.56 0.32 -0.33 0.46 0.81 0.24 -1.02 -1.49 -0.58 0.74 1.79 0.61 0.31 0.23 0.26 0.04 -0.6 0.55 -0.7 -0.9 0.64
0.46 0.8 0.21 0.32 2.49 -0.1 0.47 1.11 0.36 0.63 - - 1.3 - -1.63 -3.01 -3.58 -0.85 0.78 -4.08 0.71 1.66 1.75 - -0.43 - - 0.55 -4.06 -0.98 -1.94 - -5.42 - -
-0.25 0.22 -0.46 -0.3 0.12 0.4 0.63 -0.45 0.55 0.33 -0.32 -0.52 1.24 -0.54 0.12 -1.18 0.26 0.56 0.53 -0.17 0.62 0.88 0.46 -0.81 -2.16 -0.24 -1.37 -0.05 -0.49 -1.05 -0.97 -1.77 -0.24 -0.92 0.89
0.63 0.39 0.65 0.15 -1.12 -0.02 -0.49 -0.62 -0.06 -0.03 0.01 0.35 -1.63 -0.01 -0.01 0.11 -1.2 0.2 -0.03 -0.42 -2.42 -1.41 -2.79 0.5 -0.93 0.09 -0.76 -0.64 0.31 0.57 0.21 1.1 0.72 1.58 -3.05
-2.12 -2.86 -2.04 - -0.8 -0.95 -2.76 -0.86 -2.9 -2.86 -1.87 -1.38 -1.35 -0.17 - - - 0.83 2.44 -3.41 -2.83 -2.61 - - - 3.02 3.38 -2.9 1.61 - - - -0.29 -3.36 -2.41
-0.37 -0.34 -0.06 0.17 -0.08 0.13 0.14 0.13 0.65 0.59 -1.0 -0.85 -0.17 -0.22 -0.8 -0.15 -1.63 -0.09 0.32 0.5 -2.13 -0.99 -2.53 -0.13 -0.53 1.2 1.15 -0.23 1.08 -0.05 0.24 -0.22 -0.59 -0.0 0.23
-5.42 -2.41 -3.18 -1.9 -3.36 -3.52 -1.26 -1.49 -2.81 -4.13 -4.32 -4.02 0.48 -2.59 -2.5 -4.74 - 1.04 0.96 -0.21 - -3.55 -5.09 -0.23 0.61 2.32 2.71 -3.05 -0.27 1.82 2.59 0.85 -4.62 -4.33 -3.7
-0.0 -0.09 -0.37 -0.07 0.51 0.34 0.07 -0.65 0.57 0.34 -0.37 -0.34 0.36 -0.51 -0.07 -0.66 -0.16 -0.01 0.08 0.03 -0.98 -0.25 -0.94 0.13 -0.24 -0.22 -0.43 0.23 -0.26 0.58 0.27 0.8 0.06 0.31 -0.07
0.73 0.35 -0.1 -0.51 -0.96 0.04 -0.78 0.31 -0.5 -0.12 0.06 0.75 1.18 -0.5 -0.27 -1.06 -0.8 0.81 1.04 -1.17 -0.92 -0.02 -1.81 0.1 -0.53 -1.65 -1.45 -2.05 -1.12 1.25 0.03 1.12 -0.02 0.96 -2.8
2.03 1.51 0.66 0.71 -1.14 0.88 0.72 1.53 0.55 0.51 -1.69 -0.93 1.44 -2.67 -1.67 -2.83 -2.74 1.09 1.38 -3.47 - - - -1.36 -1.61 -0.79 -1.15 -1.34 -1.33 -0.39 -1.0 -1.13 -1.09 0.21 -2.95
-0.16 0.65 -0.25 0.49 -0.15 0.07 0.41 -0.44 0.25 0.5 0.55 0.68 -0.22 -0.0 -1.36 -0.66 -2.15 -0.06 0.5 0.05 0.42 0.45 0.71 -0.29 -0.63 -0.36 -1.5 -0.13 -0.05 -0.37 -0.45 -0.01 0.46 0.16 -1.76
-0.9 -1.86 -1.35 -1.81 -0.16 -0.41 -3.37 -0.41 -0.19 -0.09 0.47 0.48 2.04 -2.01 - - - 0.21 0.55 0.41 0.65 1.08 -1.65 -0.87 -2.08 -2.48 -0.08 -3.49 -0.13 1.46 -1.07 1.9 0.99 -0.35 0.52
-2.1 -1.57 -2.37 -0.76 1.13 -1.27 -0.02 -0.67 -0.74 -2.11 - - - - - - - -1.02 2.08 1.4 -3.44 -1.51 - 4.0 -3.36 - - 0.74 -7.05 0.68 -3.21 0.37 - - -
-0.05 -0.22 -0.53 -0.66 0.23 -0.34 -1.0 -0.62 -0.02 -0.29 -0.4 -0.65 0.45 -1.26 1.27 0.24 1.29 0.5 0.03 -0.08 -0.75 -1.35 -0.83 0.23 0.38 0.86 0.17 1.04 -1.09 -0.34 0.41 -0.95 -0.14 -0.67 -0.53
-2.98 -3.54 -1.13 -1.78 -0.2 -2.09 - 0.26 -1.77 -1.47 -2.7 -2.32 -0.06 -1.8 -3.21 -1.35 -1.5 0.33 0.7 -0.26 2.2 1.74 0.6 0.84 0.65 2.13 1.86 -2.86 -0.73 -0.6 0.64 -1.09 -0.76 -7.83 -4.85
-0.22 -0.71 -0.2 -0.93 -1.35 0.24 -0.81 1.74 -0.13 0.22 -1.94 -1.67 -0.15 -2.47 -3.63 -2.99 - 0.09 0.41 -3.57 -3.25 -2.68 - -1.44 -2.15 1.99 2.84 -1.18 1.59 0.31 0.75 -0.91 -2.06 -0.23 -1.93
-0.7 0.0 -0.62 -0.05 -0.92 -0.23 0.36 -0.42 -0.26 -0.05 -0.66 -0.27 2.02 -0.74 -1.19 -1.18 -0.32 0.29 0.0 0.47 -3.95 -1.94 -2.83 0.17 0.42 0.22 -0.42 0.3 -0.61 1.02 0.55 1.13 -0.32 0.13 -0.23
0.57 0.05 0.25 -0.23 -0.85 -0.27 -0.74 -0.45 0.05 -0.22 0.41 0.71 0.58 0.01 -0.61 -1.16 -2.66 0.6 1.51 -2.49 -0.41 0.07 -1.12 -2.57 -1.95 0.04 0.66 0.92 -1.93 -0.62 -1.15 -0.97 0.27 1.85 -0.57
0.26 0.08 0.54 0.21 -2.36 -0.45 -0.57 -0.99 -0.29 0.05 0.14 0.43 -2.17 -1.8 1.02 0.58 0.88 0.85 1.12 -1.36 -1.19 -1.44 -1.77 -0.32 -2.2 0.38 -0.56 -2.86 0.4 -0.09 -0.31 0.08 0.92 1.57 -1.93
-7.45 -5.19 -6.44 -5.83 -0.56 -7.26 -4.92 -4.28 -5.26 -6.59 1.07 1.16 1.67 -0.73 -1.95 -2.56 -1.78 0.88 0.53 1.91 0.27 -1.19 -0.84 -2.28 -1.26 1.41 0.8 -4.03 -2.89 -2.64 -3.24 -2.28 0.99 -0.76 2.96
- - - - - - - - - - - - - - - - - 4.24 4.01 - - - - - - - - - - - - - - - -
-0.29 -0.17 -0.31 0.15 -0.68 -0.69 0.08 -0.24 0.05 0.07 0.8 -0.67 0.04 -0.87 -1.22 -0.59 -1.06 0.85 0.94 -2.48 -3.47 -2.77 -2.51 -0.24 0.23 0.46 0.32 1.21 2.05 -0.14 -0.08 -0.2 -0.44 -0.75 0.21
-1.62 -0.96 -1.53 -0.55 -0.03 -1.83 -0.69 -0.27 -0.95 -0.66 -0.02 0.74 -1.09 1.1 -1.57 -1.27 -2.24 -0.88 2.22 -0.99 -1.05 0.36 -0.68 0.25 -1.06 -2.59 -1.36 0.79 -0.37 0.67 0.39 0.14 0.06 0.16 2.02
- - - - - - - - - - -0.77 -1.47 0.84 - 0.09 2.57 - 2.51 3.73 - - - - - - - - - - 2.04 - -2.4 -8.6 -0.91 0.61
-2.08 -1.21 -1.81 -1.68 1.53 -0.2 -1.19 -0.58 -0.23 -0.56 -1.18 -0.81 1.61 -1.81 0.79 -0.82 0.75 0.3 1.41 -0.82 -0.13 -0.79 -0.68 -1.34 -0.94 1.21 -0.64 1.56 -1.38 -0.39 -0.7 -1.01 -0.84 -0.21 0.95
0.23 0.09 -0.12 -0.14 -0.15 0.3 -0.23 -0.84 0.43 0.36 0.24 -0.53 0.55 -1.55 0.42 -0.27 0.2 0.23 0.29 -0.71 0.42 0.58 0.09 0.19 -0.29 -0.63 -0.54 0.62 -0.4 -0.7 -0.4 -1.14 -0.44 -0.34 0.94
- - - - - - - - - - 0.15 -3.51 - -1.15 - - - 1.44 3.28 - 3.91 1.91 - - - - - - -3.66 -6.82 - -11.78 -1.14 -1.06 0.13
- 0.74 - -0.8 -0.01 - - -0.8 - - 1.66 1.46 -0.87 - - - - -2.3 -0.37 - -0.69 -0.63 -1.06 - - 3.35 2.13 - -2.71 -2.16 -0.16 - 2.18 0.4 -1.93
0.04 0.88 0.18 1.16 -0.44 0.64 1.33 0.87 1.04 0.94 -2.81 -2.44 -0.39 -1.32 -1.82 -0.96 -1.48 0.28 0.36 -2.53 -6.32 -4.31 -5.71 -1.36 -1.88 0.47 1.1 1.47 1.11 -0.41 -0.78 -0.13 -2.38 -2.4 0.03
-0.9 0.49 -0.14 0.79 -0.47 -0.24 0.48 -0.0 0.18 0.25 -2.46 -2.24 -0.03 -2.45 -1.06 -1.15 -1.21 1.79 1.83 1.15 -3.23 -3.29 -1.81 -1.58 -0.6 0.02 -1.07 0.05 1.5 0.27 -0.03 0.37 -1.85 -1.19 -0.06
-0.28 0.97 0.02 0.93 -0.55 0.04 0.66 -0.42 -0.43 0.31 -1.3 -0.84 -1.51 0.87 -0.69 -0.48 -0.46 1.8 1.13 0.29 -1.8 -1.24 -2.33 -0.94 -2.12 0.03 -0.8 -0.85 -0.02 0.69 -0.51 1.41 -1.01 -0.79 -1.56
-0.54 -0.0 -0.6 0.16 -0.37 -0.37 0.65 -1.03 0.08 0.31 -1.13 -1.54 1.97 -0.42 -0.71 -0.64 -1.05 0.6 0.53 -0.34 0.39 0.55 0.74 0.28 0.66 -2.18 -3.3 -0.82 0.16 0.46 -0.96 1.36 -0.93 -1.32 -4.36
-2.2 -0.44 -1.38 -1.1 -0.33 -1.56 -0.97 1.52 -0.97 -0.98 0.18 0.41 2.2 1.58 -2.06 -4.02 -1.79 0.23 0.74 -1.67 0.2 1.11 -1.19 -0.13 -5.75 -0.38 -2.55 -1.63 -1.67 1.68 0.07 0.27 0.06 -1.88 -0.27
0.52 0.37 0.23 0.07 -0.12 -0.05 -0.01 -0.37 0.36 0.15 0.39 0.48 -0.13 0.26 -0.21 -0.61 0.18 0.36 0.53 -1.1 -2.75 -1.1 -2.56 -0.25 -2.41 -0.16 -0.21 1.12 -0.64 -0.27 -0.55 0.1 0.47 0.95 0.06
-0.48 0.35 -0.95 0.21 0.83 -0.21 0.46 1.9 -0.67 0.04 -0.03 0.5 0.14 -0.49 -1.72 -2.23 -3.19 -0.16 0.18 -1.36 1.33 1.66 0.59 -0.44 -1.92 -0.43 -2.17 -0.46 -0.53 -0.81 0.13 -0.67 0.51 -4.54 -1.49
0.37 0.16 -0.02 0.28 -0.43 -0.21 0.1 -0.99 0.22 0.37 -0.71 -0.07 -0.94 -1.4 0.25 -0.21 0.14 0.77 0.96 -0.83 0.52 -0.26 0.42 -0.18 -0.71 -0.65 -0.79 -0.2 -0.07 0.23 -0.18 0.61 -0.48 1.13 -1.73
-0.76 0.1 -0.85 0.28 -0.57 -0.34 0.73 0.36 -0.2 0.05 -0.92 -0.62 1.27 -0.24 -0.77 -0.98 0.35 0.19 0.71 0.09 -0.44 -1.07 -0.83 0.37 0.35 -0.12 -0.99 -1.13 -0.24 0.9 -0.38 1.56 -0.66 -0.41 -0.79
-0.18 2.05 1.14 0.64 1.59 -0.22 1.42 1.76 0.99 0.56 -3.93 -2.31 0.93 - - - - -3.06 0.92 -0.2 0.79 0.67 - -1.06 - - - 0.92 -7.2 -1.37 -1.38 -0.82 -1.15 -2.65 -3.21
-0.54 0.05 -0.62 0.33 0.01 0.22 0.77 -0.19 0.64 0.59 -0.73 -0.64 0.98 -0.23 -0.7 -0.99 -0.34 0.11 0.12 -0.58 -0.74 -0.66 -0.35 0.36 0.69 0.14 -0.34 0.65 -0.49 0.21 -0.35 0.63 -0.72 -0.58 -0.19
0.3 0.53 0.11 0.08 0.17 0.6 -0.15 -0.18 0.49 0.47 -1.37 -1.38 1.03 -2.01 0.84 0.24 -0.93 -0.15 -0.54 -0.34 0.45 0.05 -0.09 0.21 -0.65 0.73 0.71 0.58 -0.4 -0.99 -0.05 -2.2 -1.06 -2.8 0.07
0.69 1.36 -0.07 0.98 0.22 1.11 1.76 0.69 0.89 0.21 -0.12 -0.09 1.07 -4.8 -2.15 -2.29 -4.28 -0.94 0.4 -1.14 -0.75 0.08 -1.78 -2.47 -2.25 -0.48 -1.06 0.67 -2.6 -0.84 -3.64 -0.74 0.05 0.29 0.0
- - - - - - - - - - - - - - -2.42 -1.53 - 2.41 2.77 4.26 - - - - 1.46 - -2.17 - - - - - - - -2.19
0.34 0.41 0.73 0.58 -0.87 0.08 0.16 -0.35 0.19 0.57 -0.27 0.13 -1.78 -0.82 0.43 0.73 -0.91 0.91 1.18 -0.08 -5.75 -2.86 -5.78 -0.27 -1.54 0.57 0.1 -0.71 -0.68 -0.49 -0.39 -0.64 0.58 0.97 -0.02
0.84 0.97 0.42 1.38 -0.62 1.02 0.85 1.22 1.15 1.13 -4.01 -2.9 -1.29 -3.31 -2.52 -1.9 -4.16 0.15 0.68 -1.72 -3.26 -2.04 -4.32 -1.4 -1.97 0.55 0.54 1.63 0.12 -0.6 -0.07 -1.44 -2.34 -2.05 0.38
-1.71 -0.49 -1.58 -0.05 -0.11 -0.44 0.38 -0.66 -0.37 -0.21 -2.08 -1.78 0.4 -0.95 0.06 0.03 0.27 1.98 1.99 0.09 -4.18 -2.81 -2.63 -0.66 0.72 0.6 -1.17 0.47 0.67 0.07 -0.26 0.43 -1.56 -3.28 0.69
-0.82 0.19 -0.76 0.32 0.25 -0.08 0.84 -0.29 0.07 0.19 0.86 -0.38 -0.17 1.1 -0.91 -1.16 -2.62 0.34 0.78 0.69 -0.34 -0.37 -0.5 -0.12 -0.79 -2.35 -2.89 -0.06 -0.22 0.86 -0.43 1.25 -0.21 -0.55 -0.38
-0.55 -1.3 -2.48 -1.25 -0.39 -1.47 - -1.28 -2.37 -2.25 0.87 0.45 2.67 -1.37 -0.98 - -1.36 1.1 0.78 -0.85 1.89 2.72 -1.51 0.27 - -0.09 -1.62 -0.81 -3.52 - - - 0.68 -1.52 -1.4
- - - - - - - - - - - - - - - - - 2.82 -0.69 4.77 - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - 5.13 - - - - - - - - - - - - - - - -
-0.11 0.27 -0.01 0.47 0.02 -0.08 0.8 -0.44 0.34 0.47 -0.4 0.3 -0.56 1.2 -1.62 -0.57 -2.6 0.59 0.94 -0.55 0.16 0.16 0.78 -0.73 -1.16 -1.26 -2.43 -0.14 0.41 0.07 -1.64 0.76 -0.33 0.3 -2.07
-3.01 -2.37 -1.97 -1.25 0.34 -2.36 -2.42 -0.61 -2.3 -1.93 0.94 1.29 -1.49 0.5 -1.65 -0.6 -1.51 -0.05 -1.21 -1.68 0.7 0.6 0.01 1.16 1.36 -0.61 2.14 -1.29 -1.19 0.6 -0.2 -0.28 1.22 -2.39 0.56
-1.1 -0.45 -1.69 -0.13 0.47 -0.61 0.23 -1.35 -0.17 -0.19 0.5 0.65 0.21 -0.35 -0.3 -0.34 0.14 0.75 0.98 -0.15 -0.54 -0.54 -0.02 0.06 -0.06 -0.49 -1.39 -0.1 0.07 -0.24 -0.79 0.38 0.95 0.75 0.29
-2.7 -3.06 -2.89 -3.33 -1.64 -2.0 -2.51 -0.04 -2.51 -2.69 0.2 1.46 -0.45 -1.9 -1.26 -2.15 -2.44 0.83 1.7 1.67 1.35 0.66 -0.7 -1.01 -1.16 2.55 1.83 -2.12 -2.75 -1.19 -1.68 -1.16 -0.11 -3.75 -0.21
0.62 1.07 0.51 0.93 -0.93 0.66 0.5 0.54 0.56 0.64 -2.14 -1.53 -0.67 -4.01 -1.12 -0.2 -4.19 0.93 0.92 -1.82 -7.07 -5.04 -6.98 -2.56 -2.39 1.27 0.15 2.57 -0.54 -1.55 -1.05 -2.03 -1.35 -1.52 -0.13
-1.13 -1.47 - - 2.43 -1.65 -2.38 - -0.55 -2.47 2.17 1.78 - -0.43 -2.17 - - -0.86 0.45 0.64 1.06 0.28 -2.69 0.07 - - - 0.66 -0.85 - - - 2.53 -0.42 0.93
-0.07 0.56 0.05 0.29 0.78 0.32 1.13 0.41 0.55 0.32 0.3 0.82 1.03 -1.05 -0.05 -0.76 -0.06 -0.34 -0.92 -0.04 0.04 0.92 -0.03 -0.27 -1.46 -3.28 -4.24 0.57 -0.89 -1.84 -2.23 -2.07 0.6 -0.79 -0.48
- - - - - - - - - - - - - - - - - 1.51 3.84 - 2.62 3.55 - - - - - - - - - - - - -
-0.4 0.28 -0.9 0.62 -0.02 -1.05 0.63 -1.65 0.05 0.36 -4.42 -3.72 2.52 - 1.46 1.2 -1.71 -0.06 0.29 -4.67 -0.17 -1.38 -1.86 - - 1.41 2.37 0.46 -0.35 -2.74 -2.29 - - - -
0.23 0.41 -0.07 0.27 0.12 0.49 0.01 -0.47 0.78 0.64 -0.78 -0.5 -0.43 -0.92 0.02 0.48 -2.5 0.37 1.28 -0.92 0.29 -0.23 -0.38 -0.49 -1.3 -0.77 -0.69 1.11 -0.72 -0.77 -0.17 -2.2 -0.5 0.35 0.88
0.75 -0.62 0.21 -1.12 0.6 0.99 -1.06 0.1 0.69 0.33 - -8.02 0.46 - 0.74 0.2 -0.4 -0.44 -0.57 -0.37 0.67 0.3 1.12 0.66 -0.32 1.41 1.14 0.13 -1.16 -0.4 0.11 -1.39 - - -
- - - - - - - - - - - - - - - - - 1.51 3.84 - 2.62 3.55 - - - - - - - - - - - - -
0.84 0.06 0.85 -0.17 -0.86 0.14 -1.92 -0.47 0.06 0.34 -0.59 -0.45 -1.33 -1.51 0.74 0.42 0.95 0.62 0.1 -0.31 -0.28 -0.68 -0.6 0.61 -0.64 -0.23 -1.21 -0.34 0.86 0.06 -0.12 0.29 0.1 0.66 -5.66
-0.13 1.72 -0.15 -0.83 1.02 1.61 - 0.14 0.03 - -1.92 -2.91 -0.98 -0.95 - - - 2.2 2.28 -0.23 0.15 -1.16 1.91 - -1.07 -1.49 - -0.92 -1.44 -0.77 0.07 0.37 -1.24 - -
0.19 0.58 0.42 0.66 -0.38 0.24 0.58 0.17 0.19 0.46 -1.95 -1.62 -0.41 -0.67 -0.17 -0.25 0.21 0.15 0.46 -2.26 -8.48 -5.09 -9.15 0.67 -0.49 -0.82 -1.52 0.56 0.29 1.11 0.61 1.42 -1.48 0.18 0.03

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.