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Heatmap: Cluster_61 (HCCA)

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Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
3.87 6.22 4.51 3.52 3.02 4.55 4.04 0.93 3.88 5.95 0.0 0.03 2.45 0.0 0.83 1.59 1.6 2.22 3.44 2.02 1.27 7.44 1.41 0.8 0.0 1.79 0.24 2.29 1.24 0.36 0.91 0.0 0.0 0.08 0.0
1.59 0.84 1.12 1.21 0.68 2.24 0.92 2.02 0.93 1.34 0.0 0.0 0.0 0.0 0.0 0.03 0.01 0.03 1.83 0.11 0.02 0.07 0.11 11.75 0.01 0.0 0.0 1.15 0.97 0.01 0.02 0.03 0.0 0.0 0.0
159.02 220.25 127.81 203.08 392.12 190.32 231.68 95.45 274.2 219.35 160.3 145.89 281.34 274.94 459.58 388.73 248.22 428.18 544.75 368.7 153.32 111.28 209.0 520.15 1076.34 474.83 387.32 365.03 372.77 320.42 206.27 456.76 192.33 166.95 485.66
0.37 0.47 0.31 0.33 1.51 0.25 0.37 0.58 0.34 0.41 0.0 0.0 0.66 0.0 0.09 0.03 0.02 0.15 0.46 0.02 0.44 0.85 0.9 0.0 0.2 0.0 0.0 0.39 0.02 0.14 0.07 0.0 0.01 0.0 0.0
21.61 29.86 18.72 20.84 27.85 33.92 39.7 18.77 37.61 32.29 20.56 17.97 60.65 17.62 27.94 11.37 30.71 38.0 37.17 22.88 39.44 47.38 35.25 14.61 5.75 21.71 9.96 24.9 18.31 12.42 13.1 7.53 21.75 13.58 47.63
144.81 122.45 146.2 103.76 42.97 92.23 66.43 60.56 89.53 91.4 94.28 119.29 30.24 92.75 92.72 100.46 40.6 107.02 91.65 69.52 17.48 35.11 13.52 131.82 48.83 99.08 54.98 59.71 115.35 138.42 108.26 200.32 154.19 278.67 11.24
8.64 5.16 9.13 0.0 21.53 19.43 5.54 20.74 5.02 5.18 10.25 14.41 14.77 33.45 0.0 0.0 0.0 66.72 203.43 3.54 5.29 6.16 0.0 0.0 0.0 304.34 390.79 5.01 114.26 0.0 0.0 0.0 30.72 3.67 7.08
27.96 28.57 34.56 40.63 34.24 39.59 39.9 39.49 56.59 54.23 18.11 20.04 32.04 31.09 20.72 32.55 11.68 33.84 45.21 51.06 8.24 18.21 6.26 32.91 24.97 82.92 80.41 30.84 76.2 34.92 42.76 31.08 23.95 36.11 42.3
0.15 1.2 0.71 1.72 0.62 0.56 2.69 2.29 0.92 0.37 0.32 0.4 8.96 1.06 1.13 0.24 0.0 13.17 12.53 5.54 0.0 0.55 0.19 5.48 9.8 31.99 42.09 0.77 5.33 22.6 38.67 11.59 0.26 0.32 0.49
28.07 26.47 21.86 26.75 40.15 35.6 29.53 17.93 41.85 35.64 21.84 22.29 36.09 19.72 26.84 17.76 25.27 27.91 29.8 28.83 14.32 23.7 14.7 30.86 23.89 24.14 20.93 32.91 23.46 42.18 34.02 49.05 29.39 35.01 26.77
16.16 12.44 9.09 6.84 5.0 9.98 5.66 12.07 6.89 8.94 10.15 16.38 22.03 6.86 8.09 4.66 5.59 17.06 20.01 4.32 5.13 9.57 2.77 10.42 6.72 3.1 3.56 2.35 4.49 23.22 9.92 21.11 9.59 18.91 1.4
8.61 6.02 3.33 3.45 0.95 3.9 3.47 6.12 3.09 3.0 0.65 1.11 5.71 0.33 0.66 0.3 0.32 4.48 5.48 0.19 0.0 0.0 0.0 0.82 0.69 1.22 0.95 0.84 0.84 1.61 1.05 0.97 0.99 2.44 0.27
91.25 159.69 85.92 143.56 91.5 107.31 135.23 75.13 121.33 144.35 149.44 162.82 87.35 101.75 39.8 64.3 22.91 97.59 143.99 105.54 135.84 138.86 166.25 83.21 65.78 79.13 36.06 93.01 98.34 78.68 74.43 101.41 140.25 113.6 30.17
0.35 0.18 0.26 0.19 0.59 0.49 0.06 0.49 0.57 0.61 0.9 0.91 2.69 0.16 0.0 0.0 0.0 0.75 0.96 0.87 1.02 1.38 0.21 0.36 0.15 0.12 0.62 0.06 0.6 1.79 0.31 2.44 1.3 0.51 0.94
0.06 0.08 0.05 0.15 0.54 0.1 0.24 0.16 0.15 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.12 1.04 0.65 0.02 0.09 0.0 3.95 0.02 0.0 0.0 0.41 0.0 0.4 0.03 0.32 0.0 0.0 0.0
356.85 318.12 257.1 235.22 435.48 291.79 185.56 241.47 364.42 303.76 281.43 236.7 507.52 154.39 893.37 437.41 903.62 525.26 377.75 349.72 219.79 145.68 208.78 433.63 480.65 671.58 415.53 759.99 173.72 292.69 491.19 192.13 337.0 232.83 255.89
0.19 0.13 0.7 0.45 1.34 0.36 0.0 1.83 0.45 0.55 0.24 0.31 1.47 0.44 0.17 0.6 0.54 1.92 2.49 1.28 7.07 5.13 2.33 2.75 2.41 6.71 5.57 0.21 0.92 1.01 2.39 0.72 0.91 0.01 0.05
8.37 5.94 8.46 5.08 3.81 11.44 5.54 32.37 8.88 11.31 2.53 3.06 8.77 1.75 0.78 1.22 0.0 10.36 12.93 0.82 1.02 1.52 0.0 3.59 2.2 38.47 69.53 4.28 29.17 12.07 16.39 5.18 2.33 8.3 2.55
16.15 26.35 17.1 25.36 13.88 22.41 33.64 19.64 21.96 25.36 16.59 21.75 106.42 15.77 11.55 11.6 21.01 32.13 26.27 36.4 1.71 6.85 3.69 29.5 35.12 30.61 19.63 32.3 17.2 53.22 38.48 57.38 21.09 28.82 22.37
7.71 5.38 6.19 4.43 2.89 4.32 3.11 3.81 5.39 4.46 6.94 8.54 7.78 5.24 3.41 2.32 0.82 7.92 14.8 0.93 3.91 5.47 2.4 0.88 1.35 5.35 8.24 9.85 1.36 3.4 2.35 2.65 6.3 18.83 3.51
16.89 14.99 20.56 16.38 2.76 10.38 9.53 7.09 11.52 14.63 15.56 19.04 3.15 4.05 28.59 21.08 26.1 25.55 30.74 5.5 6.18 5.2 4.15 11.29 3.09 18.39 9.57 1.94 18.7 13.29 11.42 14.92 26.74 42.0 3.71
0.88 4.21 1.77 2.71 104.48 1.0 5.07 7.92 4.01 1.59 322.07 344.54 489.08 92.75 39.69 26.12 44.73 282.56 222.22 577.71 185.33 67.53 86.08 31.74 64.24 408.52 267.06 9.41 20.79 24.73 16.27 31.56 305.38 90.63 1194.03
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.24 0.21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
18.58 20.32 18.44 25.35 14.19 14.14 24.11 19.27 23.6 23.92 39.6 14.28 23.39 12.5 9.75 15.18 10.96 41.12 43.72 4.09 2.05 3.35 3.99 19.25 26.68 31.39 28.49 52.84 94.25 20.74 21.59 19.78 16.77 13.52 26.29
8.96 14.16 9.57 18.84 27.0 7.75 17.12 22.98 14.26 17.51 27.29 46.22 12.95 59.1 9.32 11.48 5.83 15.05 129.07 13.92 13.31 35.37 17.29 32.79 13.27 4.6 10.79 47.75 21.36 43.86 36.15 30.45 28.72 30.8 112.27
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.15 0.09 0.45 0.0 0.27 1.5 0.0 1.45 3.36 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.04 0.0 0.05 0.0 0.14 0.39
14.63 26.86 17.7 19.35 178.62 53.91 27.24 41.47 52.86 42.02 27.42 35.32 189.78 17.66 106.93 35.21 104.5 76.5 164.45 35.09 56.62 35.97 38.69 24.46 32.34 143.93 39.75 183.46 23.83 47.41 38.28 30.77 34.59 53.57 120.15
76.51 69.65 59.81 59.16 58.88 80.32 55.67 36.34 87.69 83.52 77.01 45.04 95.36 22.22 87.25 54.02 74.82 76.35 79.85 39.93 87.26 97.33 69.61 74.59 53.48 42.19 44.78 100.55 49.44 40.18 49.5 29.56 48.03 51.63 125.41
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.47 0.04 0.0 0.19 0.0 0.0 0.0 1.15 4.15 0.0 6.4 1.6 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.19 0.2 0.47
0.0 7.9 0.0 2.71 4.68 0.0 0.0 2.72 0.0 0.0 14.91 13.02 2.59 0.0 0.0 0.0 0.0 0.96 3.65 0.0 2.92 3.05 2.26 0.0 0.0 48.25 20.73 0.0 0.72 1.06 4.22 0.0 21.38 6.25 1.24
66.49 118.83 73.4 144.16 47.63 100.79 162.6 118.42 132.65 124.04 9.24 11.9 49.29 25.96 18.35 33.2 23.14 78.49 82.79 11.17 0.81 3.26 1.24 25.2 17.54 89.69 138.27 178.48 139.17 48.76 37.64 58.96 12.46 12.25 65.91
7.81 20.46 13.26 25.21 10.54 12.34 20.31 14.59 16.57 17.36 2.65 3.08 14.26 2.68 7.0 6.6 6.32 50.43 51.89 32.51 1.56 1.49 4.17 4.9 9.61 14.8 6.97 15.12 41.39 17.59 14.28 18.85 4.06 6.41 13.97
29.78 70.85 36.6 68.8 24.64 37.05 57.01 27.08 26.86 44.66 14.71 20.23 12.65 66.21 22.39 25.82 26.22 125.77 79.02 44.27 10.4 15.26 7.2 18.86 8.3 36.88 20.7 20.04 35.6 58.12 25.34 96.29 17.93 20.85 12.26
16.35 23.74 15.67 26.49 18.42 18.35 37.34 11.67 25.14 29.44 10.87 8.19 93.04 17.81 14.48 15.2 11.5 36.01 34.27 18.75 31.04 34.7 39.8 28.85 37.54 5.25 2.41 13.42 26.5 32.79 12.17 61.04 12.48 9.54 1.16
0.26 0.88 0.46 0.56 0.95 0.41 0.61 3.45 0.61 0.61 1.36 1.59 5.52 3.58 0.29 0.07 0.35 1.4 2.0 0.38 1.38 2.58 0.53 1.1 0.02 0.92 0.2 0.39 0.38 3.85 1.26 1.44 1.25 0.33 0.99
36.64 33.16 30.12 26.87 23.54 24.75 25.42 19.88 32.89 28.53 33.59 35.65 23.43 30.7 22.15 16.77 29.07 32.89 36.9 12.0 3.81 11.99 4.36 21.57 4.83 23.01 22.23 55.9 16.49 21.2 17.48 27.41 35.57 49.49 26.81
1.1 1.96 0.8 1.77 2.73 1.33 2.11 5.72 0.96 1.58 1.5 2.17 1.69 1.09 0.46 0.33 0.17 1.37 1.74 0.6 3.87 4.85 2.3 1.13 0.41 1.14 0.34 1.11 1.06 0.88 1.68 0.96 2.18 0.07 0.54
11.46 9.88 8.77 10.79 6.56 7.66 9.47 4.46 10.33 11.43 5.4 8.42 4.62 3.35 10.53 7.68 9.74 15.09 17.28 4.98 12.71 7.42 11.84 7.84 5.43 5.65 5.12 7.69 8.45 10.36 7.82 13.53 6.37 19.43 2.67
157.53 284.86 148.07 324.26 179.84 210.22 442.56 340.94 231.4 275.33 141.2 173.59 643.65 225.48 156.11 134.68 339.06 303.75 435.24 283.24 196.09 127.06 149.7 343.87 339.48 244.75 134.47 121.68 225.87 496.02 204.16 786.14 168.24 200.25 154.55
0.45 2.13 1.14 0.8 1.54 0.44 1.37 1.74 1.02 0.76 0.03 0.1 0.98 0.0 0.0 0.0 0.0 0.06 0.97 0.45 0.89 0.82 0.0 0.25 0.0 0.0 0.0 0.97 0.0 0.2 0.2 0.29 0.23 0.08 0.06
26.65 40.06 25.28 48.57 39.07 45.23 66.3 33.98 60.25 58.47 23.3 24.81 76.44 33.12 23.83 19.55 30.68 41.86 42.23 25.86 23.27 24.56 30.48 49.75 62.56 42.75 30.68 60.72 27.53 44.84 30.31 60.04 23.49 25.91 34.02
58.06 67.9 51.02 49.77 53.22 71.51 42.57 41.62 66.14 65.29 18.24 18.13 96.57 11.71 84.14 55.71 24.82 42.38 32.36 37.28 64.25 48.91 44.23 54.53 30.04 78.0 77.31 70.67 35.75 23.69 45.54 10.26 22.61 6.76 49.51
9.68 15.44 5.73 11.83 6.99 13.0 20.36 9.7 11.12 6.95 5.54 5.63 12.57 0.22 1.36 1.23 0.31 3.14 7.93 2.73 3.58 6.34 1.75 1.08 1.26 4.3 2.87 9.56 0.99 3.36 0.48 3.59 6.23 7.34 6.02
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.05 0.0 0.75 0.96 2.68 0.0 0.0 0.0 0.0 0.39 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03
9.65 10.18 12.64 11.44 4.17 8.08 8.52 6.0 8.75 11.33 6.35 8.37 2.23 4.33 10.31 12.67 4.06 14.39 17.37 7.24 0.14 1.05 0.14 6.35 2.63 11.33 8.18 4.68 4.78 5.43 5.82 4.9 11.43 15.02 7.53
14.01 15.26 10.45 20.36 5.08 15.81 14.08 18.21 17.39 17.08 0.48 1.05 3.2 0.79 1.36 2.1 0.44 8.69 12.56 2.38 0.82 1.9 0.39 2.95 2.0 11.42 11.33 24.24 8.51 5.15 7.46 2.88 1.54 1.88 10.19
8.77 20.36 9.57 27.63 26.52 21.15 37.18 18.15 22.11 24.69 6.77 8.32 37.79 14.86 29.8 29.18 34.44 113.13 113.52 30.52 1.58 4.09 4.64 18.12 47.16 43.44 12.69 39.65 45.51 30.01 23.88 38.67 9.75 2.95 46.12
17.87 35.88 18.54 39.18 37.4 29.7 56.25 25.76 32.99 36.05 57.23 24.26 27.91 67.28 16.8 14.08 5.11 39.95 54.09 50.84 24.95 24.34 22.21 28.93 18.26 6.16 4.23 30.21 27.13 57.35 23.3 75.04 27.16 21.54 24.27
8.24 4.92 2.17 5.09 9.22 4.38 0.0 4.98 2.34 2.55 22.15 16.53 76.94 4.69 6.12 0.0 4.71 25.96 20.83 6.72 44.93 79.49 4.26 14.62 0.0 11.35 3.93 6.89 1.05 0.0 0.0 0.0 19.33 4.21 4.57
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 3.31 0.29 12.86 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
17.14 22.22 18.36 25.57 18.73 17.45 32.14 13.63 23.29 25.58 13.99 22.69 12.53 42.3 6.02 12.44 3.04 27.75 35.34 12.61 20.67 20.64 31.68 11.1 8.28 7.72 3.43 16.78 24.57 19.37 5.9 31.27 14.72 22.7 4.39
0.08 0.13 0.17 0.29 0.86 0.13 0.13 0.45 0.14 0.18 1.31 1.66 0.24 0.97 0.22 0.45 0.24 0.66 0.29 0.21 1.11 1.03 0.69 1.53 1.75 0.44 3.0 0.28 0.3 1.03 0.59 0.56 1.59 0.13 1.01
3.57 5.62 2.37 7.0 10.59 5.02 8.97 3.0 6.8 6.72 10.85 12.02 8.84 6.02 6.2 6.05 8.41 12.87 15.12 6.88 5.26 5.27 7.54 7.98 7.31 5.44 2.92 7.13 8.02 6.47 4.42 9.93 14.79 12.9 9.37
0.56 0.44 0.49 0.36 1.17 0.91 0.64 3.52 0.64 0.56 4.17 9.96 2.65 0.97 1.51 0.82 0.67 6.44 11.8 11.56 9.24 5.73 2.24 1.8 1.62 21.2 12.9 0.83 0.54 1.59 1.13 1.62 3.37 0.27 3.13
19.48 26.77 18.16 24.25 6.69 20.1 18.04 18.42 18.76 19.82 2.88 4.41 7.97 0.79 5.83 11.07 0.7 24.18 24.03 3.6 0.09 0.39 0.1 2.16 2.42 30.58 14.15 75.62 8.77 4.35 6.14 3.12 5.0 4.42 11.64
0.48 0.38 0.0 0.0 5.62 0.33 0.2 0.0 0.71 0.19 4.69 3.58 0.0 0.78 0.23 0.0 0.0 0.58 1.43 1.62 2.18 1.27 0.16 1.09 0.0 0.0 0.0 1.65 0.58 0.0 0.0 0.0 6.04 0.78 1.99
1.45 2.24 1.58 1.86 2.61 1.9 3.32 2.02 2.22 1.9 1.87 2.68 3.1 0.73 1.47 0.9 1.46 1.21 0.81 1.48 1.56 2.89 1.49 1.27 0.55 0.16 0.08 2.26 0.82 0.42 0.32 0.36 2.31 0.88 1.09
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.13 0.0 0.06 0.11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
9.76 15.6 6.9 19.77 12.67 6.2 19.83 4.09 13.31 16.45 0.6 0.97 73.57 0.0 35.4 29.42 3.92 12.34 15.7 0.5 11.39 4.92 3.53 0.0 0.0 34.03 66.18 17.63 10.06 1.92 2.62 0.0 0.0 0.0 0.0
17.35 19.64 14.04 17.86 16.04 20.76 14.88 10.66 25.28 23.03 8.59 10.42 10.93 7.81 14.97 20.58 2.6 19.1 35.82 7.8 18.09 12.57 11.33 10.53 6.01 8.66 9.16 31.77 8.99 8.65 13.16 3.2 10.42 18.81 27.09
106.36 41.26 73.44 29.15 96.21 125.58 30.46 68.03 102.27 79.66 0.0 0.24 87.52 0.0 105.9 72.68 47.96 46.77 42.7 49.06 100.91 77.85 137.38 100.43 50.93 168.54 139.55 69.44 28.46 48.1 68.65 24.23 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.13 0.0 0.06 0.11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
141.15 81.85 141.88 69.81 43.33 86.81 20.8 56.85 81.8 99.57 52.3 57.49 31.18 27.53 131.66 105.24 151.88 120.93 84.13 63.35 64.66 48.94 51.93 119.62 50.54 67.01 34.05 61.97 142.75 82.16 72.53 96.35 84.44 123.97 1.55
0.39 1.4 0.38 0.24 0.86 1.3 0.0 0.47 0.43 0.0 0.11 0.06 0.22 0.22 0.0 0.0 0.0 1.96 2.07 0.36 0.47 0.19 1.61 0.0 0.2 0.15 0.0 0.23 0.16 0.25 0.45 0.55 0.18 0.0 0.0
195.03 254.64 228.91 269.4 130.58 200.76 254.66 191.53 194.2 234.04 44.07 55.55 128.43 107.01 151.99 143.1 196.97 189.03 234.75 35.63 0.48 5.01 0.3 272.08 121.62 96.34 59.4 251.0 208.58 368.57 259.75 455.52 61.03 193.59 174.08

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)