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  5. PTI_09G02840.1

PTI_09G02840.1


Description : Alginate lyase domain [Interproscan].


Gene families : OG_01_0005138 (OrthoFinder) Phylogenetic Tree(s): OG0005138_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: PTI_09G02840.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
PTI_00G03870.1 No alias Hypothetical protein 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEA Interproscan
CC GO:0042597 periplasmic space IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000339 RNA cap binding IEP Enrichment
MF GO:0000340 RNA 7-methylguanosine cap binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0005436 sodium:phosphate symporter activity IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
BP GO:0044341 sodium-dependent phosphate transport IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR008397 Alginate_lyase_dom 552 801
No external refs found!