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  5. PTI_09G01950.1

PTI_09G01950.1


Description : AMP-binding enzyme, C-terminal domain; AMP-dependent synthetase/ligase [Interproscan].


Gene families : OG_01_0000081 (OrthoFinder) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_09G01950.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
OT_01G04590.1 No alias Phosphopantetheine binding ACP domain; AMP-dependent... 0.03 OrthoFinder
SymbC1.scaffold23619.1 23619.1 AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.01 OrthoFinder
Transcript_contig_54181 54181 AMP-dependent synthetase/ligase; AMP-binding enzyme,... 0.01 OrthoFinder
Transcript_contig_58430 58430 AMP-dependent synthetase/ligase; AMP-binding enzyme,... 0.01 OrthoFinder
XM_003054995.1 MicpuC2_24314, 24314 AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.02 OrthoFinder
lcl|BLLF01002697.1_cds_GFH25030.1_19507 HaLaN_22922, GFH25030 2-hydroxyacyl-lyase 1 0.02 OrthoFinder
lcl|VRMN01000020.1_cds_KAA8490660.1_4702 KAA8490660 Acyl-CoA synthetase family member 3, mitochondrial 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 72 463
IPR025110 AMP-bd_C 472 548
No external refs found!