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  5. PTI_09G00250.1

PTI_09G00250.1


Description : WASH complex subunit 3; Formin, FH2 domain [Interproscan].


Gene families : OG_01_0000242 (OrthoFinder) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_09G00250.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020961.51 tig00020961_g16673.t1 Formin-like protein 18 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre03.g166700 30787105, FOR1 Formin-like protein 12 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder
Cre06.g311250 30779791 No description available 0.01 OrthoFinder
Cz04g22100.t1 No alias Formin, FH2 domain [Interproscan]. 0.01 OrthoFinder
EOD32390 No alias Formin, FH2 domain [Interproscan]. 0.01 OrthoFinder
Sro1229_g254470.1 Contig3654.g28211 Disheveled-associated activator of morphogenesis 1 0.04 OrthoFinder
Sro964_g225470.1 Contig2151.g18109 Formin-like protein 0.07 OrthoFinder
SymbC1.scaffold8863.1 8863.1 Peptidyl-prolyl cis-trans isomerase, PpiC-type; Formin,... 0.01 OrthoFinder
TP10G01100.1 No alias WASH complex subunit 3; Formin, FH2 domain [Interproscan]. 0.08 OrthoFinder
TP22G00600.1 No alias Formin, FH2 domain [Interproscan]. 0.02 OrthoFinder
Vocar.0001s1807.1 32884548 Pleckstrin homology domain; Formin, FH2 domain [Interproscan]. 0.01 OrthoFinder
XM_003059141.1 MicpuC2_27253, 27253 Formin, FH2 domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33313.1_3536 PRW33313 Formin 20 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499585.1_8538 KAA8499585 Formin-like protein 13 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496590.1_319 KAA8496590 Formin-like protein 20 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0071203 WASH complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
CC GO:0030906 retromer, cargo-selective complex IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0043531 ADP binding IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR019309 WASHC3 1445 1486
IPR019309 WASHC3 1382 1438
IPR015425 FH2_Formin 1507 1911
No external refs found!