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  5. PTI_08G04270.1

PTI_08G04270.1


Description : Proteasome, subunit alpha/beta; Proteasome alpha-subunit, N-terminal domain [Interproscan].


Gene families : OG_01_0002071 (OrthoFinder) Phylogenetic Tree(s): OG0002071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_08G04270.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000217.21 tig00000217_g19154.t1 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.1 OrthoFinder
Cre06.g304300 30779553, POA6 Protein degradation.26S proteasome.20S core... 0.25 OrthoFinder
Cz08g17010.t1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.09 OrthoFinder
EOD07672 No alias Proteasome alpha-subunit, N-terminal domain [Interproscan]. 0.1 OrthoFinder
EOD17162 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
Sro17_g012260.1 Contig269.g3405 Proteasome subunit alpha type-1 0.38 OrthoFinder
SymbC1.scaffold4308.2 4308.2 Proteasome, subunit alpha/beta; Proteasome... 0.01 OrthoFinder
TP06G02620.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.25 OrthoFinder
Transcript_contig_58532 58532 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.03 OrthoFinder
Vocar.0020s0163.1 32886732 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.07 OrthoFinder
XM_002507301.1 MICPUN_55518, 55518 Proteasome subunit alpha type-1-b (PAF2) 0.02 OrthoFinder
lcl|BLLF01000544.1_cds_GFH12831.1_7308 HaLaN_08589, GFH12831 Proteasome subunit alpha type 0.02 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32598.1_4029 PRW32598 Proteasome subunit alpha type-1-B-like isoform A 0.06 OrthoFinder
lcl|VRMN01000017.1_cds_KAA8490914.1_6117 KAA8490914 Proteasome subunit alpha type-1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
MF GO:0016289 CoA hydrolase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042176 regulation of protein catabolic process IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0045048 protein insertion into ER membrane IEP Enrichment
BP GO:0051205 protein insertion into membrane IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 29 217
IPR000426 Proteasome_asu_N 6 27
No external refs found!