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  5. PTI_08G00960.1

PTI_08G00960.1


Description : Copine [Interproscan].


Gene families : OG_01_0000243 (OrthoFinder) Phylogenetic Tree(s): OG0000243_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_08G00960.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021742.16 tig00021742_g23328.t1 Protein BONZAI 3 OS=Arabidopsis thaliana 0.01 OrthoFinder
Transcript_contig_69665 69665 Hypothetical protein 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496667.1_396 KAA8496667 Protein BONZAI 1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
BP GO:0007033 vacuole organization IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0019781 NEDD8 activating enzyme activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0045116 protein neddylation IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:1905037 autophagosome organization IEP Enrichment
InterPro domains Description Start Stop
IPR010734 Copine_C 408 609
No external refs found!