1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_08G00930.1

PTI_08G00930.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000022 (OrthoFinder) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_08G00930.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
PTI_00G00670.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_00G00820.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_00G03380.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_00G03780.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_00G03790.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_01G04550.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_02G00010.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_02G04470.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_03G04560.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_05G04500.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_08G04530.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_08G04540.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_08G04590.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_10G00130.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_11G00100.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_11G00140.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_11G04480.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_11G04500.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_13G00100.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_13G00110.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_13G00130.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_14G01300.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_14G02130.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_18G00060.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_18G00120.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_18G00340.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_18G00350.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_19G03130.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_21G02780.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_22G00420.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_22G00430.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_26G00300.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_26G00310.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_29G00120.1 No alias Hypothetical protein 0.01 OrthoFinder
PTI_29G00130.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_29G01330.1 No alias 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.01 OrthoFinder
PTI_31G00160.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_31G00170.1 No alias Hypothetical protein 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005436 sodium:phosphate symporter activity IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0044341 sodium-dependent phosphate transport IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 780 982
No external refs found!