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  5. PTI_08G00690.1

PTI_08G00690.1


Description : Proteasome, subunit alpha/beta [Interproscan].


Gene families : OG_01_0002503 (OrthoFinder) Phylogenetic Tree(s): OG0002503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_08G00690.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020848.74 tig00020848_g14605.t1 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder
Cre10.g424400 30789754 Protein degradation.26S proteasome.20S core... 0.28 OrthoFinder
Cz01g21220.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.12 OrthoFinder
Dusal.0023s00001.1 33198027 Proteasome, subunit alpha/beta [Interproscan]. 0.03 OrthoFinder
EOD26305 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.06 OrthoFinder
Sro25_g016920.1 Contig1417.g13031 Beta type-7 0.44 OrthoFinder
TP16G01250.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.28 OrthoFinder
Transcript_contig_55787 55787 Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
Vocar.0005s0331.1 32883543 Proteasome, subunit alpha/beta [Interproscan]. 0.08 OrthoFinder
XM_002504489.1 MICPUN_107407, 107407 Hypothetical protein (PSB7) 0.03 OrthoFinder
XM_003059798.1 MicpuC2_27663, 27663 Proteasome, subunit alpha/beta [Interproscan]. 0.08 OrthoFinder
lcl|BLLF01001402.1_cds_GFH19077.1_13554 HaLaN_15969, GFH19077 Proteasome subunit beta 0.06 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57945.1_8500 PRW57945 Proteasome subunit beta type-7-A 0.03 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492784.1_2520 KAA8492784 Proteasome subunit beta type-7-B 0.12 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042176 regulation of protein catabolic process IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0045048 protein insertion into ER membrane IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0051205 protein insertion into membrane IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 323 503
No external refs found!