Description : Multi antimicrobial extrusion protein [Interproscan].

Gene families : OG_01_0000080 (OrthoFinder) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: PTI_07G02510.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020537.49 tig00020537_g10271.t1 Solute transport.carrier-mediated transport.MOP... 0.01 OrthoFinder
Cre12.g523250 30792890 Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder
Dusal.2268s00001.1 33203467 Multi antimicrobial extrusion protein [Interproscan]. 0.01 OrthoFinder
Sro1515_g279010.1 Contig1412.g12973 Protein DETOXIFICATION 0.04 OrthoFinder
Sro514_g158000.1 Contig3991.g30641 Toxin extrusion protein 1 0.05 OrthoFinder
Vocar.0050s0043.1 32892363 Multi antimicrobial extrusion protein [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57343.1_9203 PRW57343 MATE efflux family 0.04 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45075.1_1933 PRW45075 TRANSPARENT TESTA 12-like 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR002528 MATE_fam 326 475
IPR002528 MATE_fam 93 245
No external refs found!