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  5. PTI_07G01220.1

PTI_07G01220.1


Description : PCIF1, WW domain; Ankyrin repeat-containing domain; MATH/TRAF domain [Interproscan].


Gene families : OG_01_0005872 (OrthoFinder) Phylogenetic Tree(s): OG0005872_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_07G01220.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Dusal.0359s00011.1 33199877 MATH/TRAF domain [Interproscan]. 0.02 OrthoFinder
OT_05G04530.1 No alias MATH/TRAF domain [Interproscan]. 0.04 OrthoFinder
Sro1892_g303860.1 Contig2868.g22975 Ankyrin 3, node of Ranvier (ankyrin G) 0.04 OrthoFinder
Transcript_contig_89630 89630 MATH/TRAF domain [Interproscan]. 0.01 OrthoFinder
Vocar.0031s0018.1 32890126 MATH/TRAF domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 391 480
IPR020683 Ankyrin_rpt-contain_dom 298 380
IPR022035 PCIF1_WW 1067 1209
IPR002083 MATH/TRAF_dom 122 237
No external refs found!