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  5. PTI_06G03650.1

PTI_06G03650.1


Description : Mu homology domain [Interproscan].


Gene families : OG_01_0004386 (OrthoFinder) Phylogenetic Tree(s): OG0004386_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_06G03650.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_58170 58170 Mu homology domain [Interproscan]. 0.01 OrthoFinder
Vocar.0001s1726.1 32884210 Mu homology domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR028565 MHD 223 486
No external refs found!