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  5. PTI_06G01270.1

PTI_06G01270.1


Description : Proteasomal ATPase OB C-terminal domain; ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain [Interproscan].


Gene families : OG_01_0001839 (OrthoFinder) Phylogenetic Tree(s): OG0001839_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_06G01270.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.6 tig00000718_g3683.t1 Protein degradation.26S proteasome.regulatory... 0.12 OrthoFinder
Cre17.g710150 30782016, RPT4 Protein degradation.26S proteasome.regulatory... 0.24 OrthoFinder
Cz03g32090.t1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.06 OrthoFinder
Dusal.0070s00030.1 33189323 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.03 OrthoFinder
EOD05789 No alias Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.12 OrthoFinder
OT_03G03400.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.07 OrthoFinder
Sro545_g163780.1 Contig1180.g11221 S10B homolog B 0.34 OrthoFinder
TP12G00010.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.25 OrthoFinder
Vocar.0021s0037.1 32896036 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.06 OrthoFinder
XM_002499385.1 MICPUN_78817, 78817 Proteasomal ATPase 0.06 OrthoFinder
XM_003055727.1 MicpuC2_70911, 70911 Proteasomal ATPase 0.07 OrthoFinder
lcl|BLLF01001377.1_cds_GFH18904.1_13381 HaLaN_15778, GFH18904 26S proteasome regulatory subunit 0.03 OrthoFinder
lcl|BLLF01001377.1_cds_GFH18905.1_13382 HaLaN_15779, GFH18905 AAA domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59372.1_7107 PRW59372 26S proteasome regulatory ATPase RPT4 0.05 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494848.1_3378 KAA8494848 26S protease regulatory subunit 10B-like A 0.1 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0042176 regulation of protein catabolic process IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0045048 protein insertion into ER membrane IEP Enrichment
BP GO:0051205 protein insertion into membrane IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 357 401
IPR032501 Prot_ATP_ID_OB 88 143
IPR003959 ATPase_AAA_core 202 334
No external refs found!