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Description : Cryptochrome/DNA photolyase, FAD-binding domain; DNA photolyase, N-terminal [Interproscan].
Gene families : OG_01_0000085 (OrthoFinder) Phylogenetic Tree(s): OG0000085_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_05G04390.1 | |
| Cluster | HCCA: Cluster_52 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000391.2 | tig00000391_g24833.t1 | DNA damage response.DNA repair... | 0.04 | OrthoFinder | |
| Cpa|evm.model.tig00020927.32 | tig00020927_g15961.t1 | Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
| Cpa|evm.model.tig00020965.69 | tig00020965_g16882.t1 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.03 | OrthoFinder | |
| Cpa|evm.model.tig00020965.70 | tig00020965_g16882.t1 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.03 | OrthoFinder | |
| Cpa|evm.model.tig00021579.19 | tig00021579_g22443.t1 | Cryptochrome-1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
| Cre01.g030650 | 30789664 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.01 | OrthoFinder | |
| Cre02.g078939 | 30785814 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.07 | OrthoFinder | |
| Dusal.0183s00016.1 | 33202617 | Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0203s00017.1 | 33199258 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.02 | OrthoFinder | |
| EOD04007 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.01 | OrthoFinder | |
| EOD11134 | No alias | Putative Cry-DASH cryptochrome [Ensembl]. | 0.05 | OrthoFinder | |
| EOD15451 | No alias | Putative Cry-DASH cryptochrome [Ensembl]. | 0.04 | OrthoFinder | |
| OT_05G00290.1 | No alias | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.02 | OrthoFinder | |
| Sro147_g068020.1 | Contig246.g3025 | Cryptochrome DASH, chloroplastic/mitochondrial | 0.03 | OrthoFinder | |
| Sro2726_g335660.1 | Contig3579.g27670 | Cryptochrome DASH | 0.08 | OrthoFinder | |
| Sro580_g170080.1 | Contig2039.g17523 | Deoxyribodipyrimidine photo-lyase | 0.05 | OrthoFinder | |
| TP06G04930.1 | No alias | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.03 | OrthoFinder | |
| Transcript_contig_56266 | 56266 | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.02 | OrthoFinder | |
| XM_003058748.1 | MicpuC2_10436, 10436 | Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. | 0.03 | OrthoFinder | |
| XM_003061182.1 | MicpuC2_19486, 19486 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.02 | OrthoFinder | |
| XM_003062934.1 | MicpuC2_22169, 22169 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.03 | OrthoFinder | |
| lcl|BLLF01000049.1_cds_GFH06657.1_1134 | HaLaN_01325, GFH06657 | Photolyase/cryptochrome alpha/beta domain-containing protein | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| CC | GO:0005886 | plasma membrane | IEP | Enrichment |
| BP | GO:0006298 | mismatch repair | IEP | Enrichment |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006979 | response to oxidative stress | IEP | Enrichment |
| CC | GO:0009521 | photosystem | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
| BP | GO:0010024 | phytochromobilin biosynthetic process | IEP | Enrichment |
| BP | GO:0015979 | photosynthesis | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016636 | oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | IEP | Enrichment |
| BP | GO:0017038 | protein import | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Enrichment |
| MF | GO:0030983 | mismatched DNA binding | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| MF | GO:0050897 | cobalt ion binding | IEP | Enrichment |
| BP | GO:0051202 | phytochromobilin metabolic process | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
| No external refs found! |