Heatmap: Cluster_52 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
-0.03 -0.54 -0.41 -0.89 -0.42 -0.49 -1.11 -0.77 -0.88 -0.79 1.97 1.19 -0.92 -1.73 -0.25 -0.39 -0.92 -0.49 -0.13 -1.09 -0.73 0.77 -0.97 -0.44 -0.76 -1.23 -1.7 1.09 -0.77 -0.94 -0.29 -2.14 0.7 1.7 1.64
-0.01 0.79 -0.16 0.33 -0.06 -1.14 -0.51 -1.89 -0.36 -0.68 2.42 0.73 -0.51 -0.76 -0.29 -0.52 -0.68 -0.2 0.44 -1.51 -0.32 1.16 -1.35 -2.54 -2.17 0.0 -0.63 1.18 -2.8 -1.57 -0.88 -3.95 0.51 1.21 -0.43
0.55 -0.02 0.03 -0.71 -0.93 -0.02 -1.45 -0.22 -1.17 -0.31 2.17 0.39 -0.96 -0.32 -0.73 -1.41 -2.02 0.36 0.29 -3.54 0.11 1.35 -0.95 -0.72 -2.27 -1.86 -1.67 -1.18 -0.31 0.79 -0.47 1.55 -0.58 1.43 -1.19
0.0 0.14 -0.22 0.0 -0.6 0.03 0.16 -0.61 0.19 0.39 1.91 0.42 -1.0 -0.47 -0.32 -0.48 -3.63 0.37 0.52 -1.03 0.59 0.74 0.55 -0.84 -1.04 -1.08 -1.48 0.47 -0.84 -0.69 -1.0 -0.14 0.33 0.63 -0.47
-0.46 -0.32 -0.69 -0.05 -1.4 -1.12 0.08 -0.25 -1.28 -0.83 2.33 1.37 -0.12 -0.93 -2.22 -2.67 -5.48 0.71 0.16 -3.18 -0.94 0.19 -1.03 -2.03 -4.53 -3.48 -2.5 2.23 -0.34 0.32 -1.79 1.08 -1.02 1.78 -3.26
0.03 0.4 -0.14 0.08 -0.87 -0.48 -0.73 0.83 -0.44 -0.48 2.17 0.41 -0.04 -1.54 -0.41 0.13 -0.75 -0.17 0.53 -1.29 -0.12 0.59 -1.67 -0.9 -1.0 -0.4 -1.01 0.84 -1.44 -0.64 -0.21 -3.19 0.3 0.77 0.61
0.24 -0.38 -0.1 -1.41 -0.31 -0.14 -2.66 -0.01 -0.81 -0.58 1.99 1.11 -2.54 -1.65 0.5 -0.18 0.35 -0.77 -0.65 -2.9 -0.03 1.09 -0.12 -0.41 -1.81 -0.03 0.03 0.94 -1.21 -0.53 -0.13 -1.31 0.67 1.26 -0.58
0.12 -0.21 -0.42 -0.58 -0.03 0.13 -0.61 -0.14 -0.01 0.02 1.95 1.25 -1.22 -1.7 -0.49 -0.7 -1.42 0.17 -0.01 -1.52 -0.62 -0.27 -0.31 -0.89 -1.33 -0.27 -0.17 1.29 -0.58 -0.38 0.28 -0.82 1.04 0.96 -2.15
-1.14 -0.87 -1.71 -0.89 -0.65 -0.48 0.4 -1.55 -0.23 -0.48 2.52 0.6 -1.81 2.0 -1.36 -1.76 -1.12 0.43 0.73 -0.81 -1.03 0.22 -0.32 -0.96 -0.89 -0.65 0.03 -0.51 -0.96 -0.05 -0.31 1.03 -0.02 -0.99 -0.61
1.02 0.27 0.35 -0.92 -0.12 0.69 -1.01 -0.16 -0.06 0.34 1.81 0.5 -4.31 -3.64 0.75 -1.01 -0.08 -0.12 0.03 -2.41 -0.49 0.77 -0.54 -0.03 -1.93 0.43 0.65 -0.76 -0.8 0.25 0.4 0.11 -0.97 -0.03 -5.77
0.34 -0.48 -0.81 -1.25 0.39 -0.01 -1.37 -1.33 0.35 -0.23 1.88 -0.23 -4.04 -3.36 0.16 -0.56 -0.11 -0.32 0.51 -0.83 0.41 0.58 0.08 0.34 0.67 0.08 0.54 0.77 -0.92 -0.53 -0.22 -0.65 -0.91 0.36 0.18
0.36 -0.53 0.05 -1.4 -0.06 -0.01 -2.18 -1.2 -0.65 -0.52 2.28 1.32 -3.54 -1.13 -0.84 -0.69 -1.27 -0.88 -0.56 -2.29 -0.32 1.17 0.06 -0.67 -2.7 -2.46 -3.24 2.15 -1.74 -2.22 -2.49 -2.43 1.32 1.41 0.17
-1.26 -0.94 -0.56 -0.68 -1.33 -1.38 -0.21 -0.66 0.93 0.41 2.98 0.22 -3.41 -1.11 -1.41 -0.06 -2.12 0.0 -0.29 -3.65 -0.73 -0.1 -1.03 -2.27 -4.16 -3.37 -4.4 2.34 0.61 -3.54 -2.5 -3.35 0.01 1.76 -1.33
0.17 -0.09 -0.32 -0.35 0.03 0.48 0.13 -0.4 0.31 0.49 2.16 0.57 -1.41 0.38 -0.15 -1.34 -0.51 0.43 0.71 -1.0 -1.13 0.18 -1.74 -0.52 -2.9 -1.33 -1.32 -0.54 -0.71 -0.44 -0.43 -0.4 0.39 1.07 -0.21
-0.08 0.1 -0.63 -0.25 -0.45 -0.05 0.19 -0.26 -0.03 0.19 2.43 1.19 -1.78 -0.78 -1.44 -1.3 -2.65 -0.88 0.22 -2.33 1.1 1.7 0.17 -1.19 -1.98 -2.46 -2.91 0.56 -1.78 -0.78 -1.42 -0.15 0.61 -0.32 -0.23
0.69 0.6 0.61 0.51 -1.47 0.52 -0.11 -0.36 -0.04 -0.3 1.95 1.21 -3.03 -0.38 -0.68 -0.24 -1.42 -0.23 0.29 -2.34 -1.61 -0.36 -1.09 -1.8 -2.44 -0.88 -2.14 1.81 -0.97 -1.77 -1.39 -2.06 0.81 1.18 -0.52
-0.21 0.36 -0.36 0.32 -0.23 -0.08 0.37 -0.36 0.29 0.32 1.95 0.33 -0.53 -1.91 -0.46 -0.25 -1.27 -0.65 -0.02 -0.95 -0.85 0.18 -1.18 -0.35 -1.32 -0.22 -0.69 1.16 -0.6 -0.17 -0.21 -0.32 0.38 0.41 0.5
1.76 -0.53 0.07 -1.65 -1.51 -0.44 -1.99 0.36 -0.38 -1.17 3.18 0.81 -3.14 -3.04 -1.28 -2.53 -2.44 -0.22 -0.04 -2.56 -2.67 -0.68 -6.49 -0.39 -2.61 -0.95 1.01 -1.85 -3.52 -0.76 -0.23 -1.24 0.82 1.5 -0.26
-0.57 -0.57 0.02 -0.07 -0.55 -0.45 0.36 -0.53 0.11 -0.1 1.82 0.26 0.4 1.23 -1.5 -0.91 -1.97 0.45 0.28 -0.86 -1.13 -1.02 -0.89 -0.39 -1.84 -0.9 -1.28 -1.86 -0.31 0.56 -0.46 1.08 -0.46 1.51 0.23
-1.48 -0.83 -0.92 -0.4 -1.15 -1.25 0.56 -0.99 -0.81 -0.29 2.65 0.85 -0.52 1.01 -1.61 -1.12 -0.84 -1.27 -0.57 -0.99 -0.48 2.0 -0.03 -1.68 -2.23 -3.37 -4.05 0.15 -1.55 -0.28 -1.04 0.24 0.33 1.31 -0.4
-0.28 0.73 -0.03 1.07 -0.75 -0.12 1.38 -0.01 0.27 0.55 2.12 0.28 -0.96 0.02 -1.61 -1.23 -0.88 -0.25 0.48 -1.47 -3.89 -0.98 -3.41 -1.71 -2.56 -1.5 -2.14 1.62 -0.99 -0.63 -0.96 -0.25 -0.06 0.74 -0.46
-0.44 -0.3 -0.54 -0.56 -0.02 -0.05 -0.61 -0.67 -0.23 -0.07 2.06 0.71 -0.78 -0.63 0.73 0.05 0.48 -0.24 -0.07 -0.61 -0.47 0.15 -0.56 0.2 -0.16 -0.5 -1.04 0.2 -1.38 -0.43 -0.15 -1.43 0.79 -0.07 0.57
0.06 -0.1 -0.3 -0.57 -0.81 -0.41 -0.59 -0.58 -0.27 0.03 2.17 0.96 -1.06 -0.69 -0.84 -0.42 -2.76 -0.31 0.31 -1.89 0.17 1.17 -0.49 -0.91 -2.09 -1.45 -2.05 1.61 -1.25 -0.48 -0.36 -0.77 0.73 0.84 0.33
-0.14 -0.29 -0.75 -0.59 -0.51 -0.21 -0.31 -1.23 0.05 0.26 2.36 1.25 -1.14 -0.01 -0.97 -1.79 -1.27 -0.47 -0.34 -1.54 0.81 1.42 0.37 -2.23 -3.28 -2.08 -2.32 1.54 -1.71 -1.96 -2.53 -1.16 1.04 0.46 -0.04
-0.27 -0.4 -0.68 -0.31 -1.06 -0.28 -0.47 -0.68 0.24 -0.47 2.35 1.06 -2.58 -0.33 -0.85 -0.61 -1.34 -0.73 0.1 -1.33 -1.57 0.18 -1.5 -0.67 -2.13 -2.39 -2.08 2.03 -0.5 -0.35 0.2 -1.32 0.6 0.88 1.01
0.14 0.44 -0.19 0.16 -0.36 -0.23 -0.03 -0.26 -0.39 -0.0 1.46 0.96 -0.07 0.26 -1.31 -0.98 -1.23 -0.75 -0.12 -0.98 0.35 1.06 0.23 -0.77 -1.94 -0.07 -0.0 1.05 -0.19 -0.45 -0.05 -1.08 0.58 -1.29 -0.3
-0.08 -0.22 -0.55 -0.77 -1.42 -1.99 -2.33 -0.74 -1.64 -1.41 2.2 0.88 -1.96 -1.73 0.72 0.47 -0.49 -0.23 0.36 -0.77 0.68 1.52 -0.26 -2.2 -2.73 -1.27 -0.1 1.69 -1.98 -0.25 -0.49 -1.23 0.7 0.35 -0.07
0.17 0.18 -0.24 0.03 -0.71 0.26 0.13 -0.5 0.34 0.45 2.1 0.69 -1.9 -2.24 -0.6 -0.31 -3.96 0.01 -0.05 -1.36 0.59 1.37 0.29 -0.8 -1.7 -3.31 -3.57 0.84 -1.63 -0.32 -1.04 -0.58 0.1 0.52 0.49
0.32 -0.53 -1.08 -1.75 -0.72 -0.56 -2.19 -1.45 -0.99 -0.65 1.84 1.06 -0.91 -1.35 0.17 0.37 -1.88 0.18 0.26 -1.87 -0.7 0.5 -0.59 -0.14 -0.46 -0.69 -0.7 1.72 -0.34 -0.14 -0.12 -0.71 1.07 1.08 0.14
-0.36 -0.44 -0.73 -1.1 -0.59 -0.7 -1.07 -0.52 -0.69 -0.44 2.47 1.4 0.05 -1.61 0.12 -0.18 -0.14 -0.65 -0.2 -2.49 0.25 1.74 0.12 -1.69 -1.88 -2.61 -2.83 1.36 -1.29 -0.91 -1.36 -0.76 0.72 0.3 -0.68
0.91 0.13 0.24 -0.83 0.29 1.03 -1.09 -0.48 0.36 0.45 1.95 0.7 -2.27 -1.87 1.17 -0.4 1.2 -0.83 -0.73 -2.0 -0.14 0.8 -0.43 -0.53 -1.71 -1.15 -0.67 -0.22 -1.16 -1.12 -0.58 -1.53 0.29 -0.54 -1.52
-0.81 -1.1 -2.22 -2.14 -0.52 -2.03 -2.33 -0.52 -0.9 -2.11 2.48 1.54 -0.63 -0.13 -0.73 -0.56 -2.05 -1.14 -0.85 -4.58 -1.53 0.62 -1.24 -3.56 -2.81 0.65 0.72 2.24 -2.03 -1.72 -2.27 -1.01 0.9 1.05 1.39
-0.68 -0.37 -0.78 -0.36 -0.53 -0.51 -0.95 -0.82 -0.98 -0.62 2.03 1.02 -0.71 -1.09 -0.37 -0.95 -0.42 -0.65 -0.37 -0.26 -0.41 0.73 -0.42 0.2 -0.05 -0.42 -0.58 0.34 -0.68 -0.24 0.12 -1.04 0.68 0.69 1.54
-0.76 0.05 -1.7 -0.55 -1.43 -1.71 -0.16 -1.49 -1.72 -1.6 2.41 1.18 -0.83 -1.25 -1.06 -0.32 -2.92 0.18 -0.25 0.18 0.06 1.16 -0.05 -0.95 -1.58 -1.63 -1.54 1.85 0.05 -0.69 -0.38 -1.08 0.58 1.03 -0.11
0.49 0.07 -0.65 -0.99 -0.63 -0.57 -1.69 -0.55 -0.74 -0.52 2.41 1.35 -1.08 -3.08 -0.48 -0.07 -1.67 -0.93 -0.69 -2.75 0.42 0.91 -0.98 -1.83 -1.39 -1.37 -1.08 1.7 -1.47 -0.87 -0.52 -1.33 0.7 1.32 0.54
0.33 0.03 -0.48 -0.82 0.18 0.91 -0.39 -0.68 0.36 0.15 1.88 0.3 -1.55 -1.12 0.49 -1.36 0.86 -1.0 -0.88 -0.04 0.09 0.8 -0.15 0.13 -0.52 0.04 -0.3 -0.73 -1.28 -0.09 0.22 -1.49 0.23 -1.49 -0.06
-0.59 0.07 -0.92 0.21 -1.18 -0.41 0.44 -1.05 -0.2 -0.1 2.77 0.29 -1.86 -1.13 0.11 0.04 0.02 0.43 1.13 -1.87 -0.14 0.61 -0.34 -0.71 -1.13 -2.42 -2.06 0.73 -2.0 -0.63 -0.94 -0.4 -0.1 -0.2 -0.5
-0.74 0.95 -0.47 0.77 -0.47 -0.06 1.2 -0.43 0.34 0.29 2.33 0.81 -0.69 0.63 -1.97 -1.84 -1.56 -0.13 -0.58 -1.15 -4.62 -2.58 -3.65 -0.58 -1.81 -1.72 -2.18 -1.18 -0.7 0.12 -0.0 0.27 0.61 1.04 0.37
0.01 1.04 -0.33 0.55 -0.7 0.44 0.54 -0.66 -0.11 0.65 2.23 0.89 -1.68 -0.17 -2.95 -1.65 -4.66 0.29 0.64 -2.45 -1.29 0.58 -1.62 -1.32 -3.02 -1.93 -1.78 -1.05 -0.78 -0.21 -0.99 0.24 0.47 1.63 -0.91
-0.6 -0.77 -1.09 -1.19 -1.08 -1.26 -1.86 -1.57 -1.1 -0.86 2.73 1.45 -1.23 0.02 -1.43 -0.8 -2.92 -0.25 0.16 -2.42 0.39 1.36 -0.59 -0.6 -1.33 -0.83 -1.12 0.12 -2.09 -1.71 -1.18 -2.28 1.35 0.77 1.66
-3.21 -2.48 -3.26 -3.2 -0.84 -2.88 -3.3 -2.72 -3.16 -3.11 3.38 2.25 -3.23 -0.38 -2.45 -2.93 -3.68 0.23 0.88 -2.84 -1.63 1.13 -0.54 -2.88 -2.8 -2.27 -1.63 -1.99 -2.36 -1.98 -2.16 -1.83 1.96 2.12 -1.87
-0.38 -0.15 -0.26 -0.16 -0.68 -0.08 -0.45 -0.01 -0.09 0.15 1.89 0.9 -2.67 -0.32 -0.41 -0.57 -0.48 -0.16 0.1 -0.5 -0.42 0.43 -0.45 0.35 -0.94 -0.82 -0.81 -0.27 -0.34 0.53 0.78 0.01 0.62 0.26 -0.67
-0.18 0.73 0.44 1.04 -1.43 0.13 1.44 0.16 0.1 0.35 1.54 -1.43 -0.23 0.57 -2.12 -0.67 -2.44 0.61 0.41 -0.3 -2.07 -1.78 -2.53 -0.29 -1.63 -2.3 -2.79 -0.94 0.59 0.49 -0.22 1.15 -1.37 0.48 -0.8
0.39 -1.26 -0.68 -4.08 -1.48 -1.73 -6.36 -0.46 -3.73 -2.53 2.48 1.61 -5.78 -5.71 0.91 0.71 -0.24 -0.79 -0.24 -4.53 -0.46 1.11 -0.49 -2.78 -2.17 -0.98 -0.43 1.69 -3.03 -1.35 -0.42 -2.64 1.18 2.09 -5.0
0.71 -0.18 -0.38 -1.31 -0.53 0.07 -1.76 -0.03 -0.44 -0.25 2.42 1.15 0.13 -3.23 -0.6 -0.7 -1.48 -0.97 -0.04 -2.38 0.43 0.99 -1.22 -0.33 -1.36 -0.47 0.23 -0.27 -1.62 -0.01 0.24 -1.16 0.54 0.26 0.47
0.37 -0.71 -0.41 -2.26 -0.24 -0.06 -2.94 -0.59 -0.26 -0.85 2.18 1.24 -1.08 -2.2 0.02 -0.48 -0.96 -0.57 -0.54 -2.82 -0.63 0.63 -0.68 -0.35 -1.33 0.39 0.62 0.82 -2.05 -0.42 -0.1 -1.32 0.52 1.52 0.63
-0.41 -0.62 -0.61 -0.87 -0.21 -0.51 -0.85 -1.04 -0.37 -0.29 1.98 0.82 -1.03 -1.5 -0.47 -0.95 -1.51 -0.47 -0.53 -0.38 1.22 1.07 0.49 -0.03 -0.23 -1.99 -2.39 0.83 -0.98 -0.43 -0.24 -0.66 0.84 0.51 1.05
-3.46 -1.72 -5.43 -0.62 -1.16 -5.25 0.16 -0.47 -5.28 -3.57 3.5 -0.36 1.25 0.6 -0.02 -2.58 -0.25 0.38 1.99 -4.29 -5.82 -1.22 - -3.62 - -1.53 -3.94 -1.86 -3.87 0.18 -2.47 0.74 -0.0 1.53 -3.95
0.59 0.26 0.13 -0.09 -0.25 0.33 -0.4 0.09 0.21 0.23 2.36 0.2 -2.34 -1.15 -0.25 -0.81 -0.33 -0.45 -0.11 -1.03 -0.78 0.15 -1.25 -1.01 -0.13 -1.59 -0.19 0.43 -0.57 -0.96 -0.47 -1.32 0.18 0.57 0.77
-0.32 -0.07 -0.88 -0.5 -0.2 -0.2 -0.44 -1.32 -0.26 -0.05 2.4 1.22 -1.41 0.33 0.1 -0.35 -1.31 0.29 0.78 -1.26 0.27 1.39 0.08 -1.34 -2.96 -1.09 -1.71 -0.42 -1.65 -1.54 -1.03 -1.8 0.92 0.64 -0.63
-0.62 -0.46 -1.03 -0.74 -0.55 -0.41 -0.15 -0.79 -0.17 0.01 3.02 1.72 -0.18 0.18 -0.93 -1.69 -0.63 -0.44 -0.02 -0.85 0.5 1.56 -0.0 -1.61 -3.85 -4.57 -5.64 0.44 -0.91 -2.63 -3.09 -2.23 0.88 -1.39 -2.97
-0.35 -0.36 -0.14 -0.24 -1.14 -0.74 -0.68 -0.35 -0.83 -0.68 1.78 1.02 -1.7 -0.62 -1.8 0.31 -2.93 -0.09 0.27 -1.44 -0.98 -0.08 -0.4 -0.13 -0.57 -0.72 1.04 0.28 -0.04 0.79 0.72 0.69 0.42 0.56 -0.04
-0.65 -0.56 -0.96 -0.69 -0.18 -0.43 -0.45 -1.32 -0.11 -0.21 2.13 1.01 -0.86 -1.61 -0.2 -0.4 -0.35 -0.43 0.15 -0.04 -0.82 0.28 0.04 -0.5 -0.97 -1.68 -1.68 0.84 -0.19 -0.45 -0.27 -0.62 0.93 0.67 1.3
0.09 -0.01 -0.47 -0.45 -1.07 0.03 -0.21 -0.49 -0.24 -0.1 2.46 1.17 -2.18 0.98 -1.1 -1.34 -2.2 0.28 0.91 -2.84 -1.37 0.61 -1.62 -0.62 -2.87 -1.75 -1.26 0.32 -1.23 -0.25 0.14 -0.89 0.78 1.06 -0.56
-2.87 -3.66 -3.02 -2.13 1.46 -3.09 -2.69 -3.36 -2.48 -2.26 2.92 0.95 -2.33 -2.51 -5.45 - - -3.68 -4.86 -1.12 1.71 -0.6 2.16 -1.96 2.04 - - -0.59 -3.71 -1.16 -1.85 -0.69 0.87 0.72 1.09
-4.55 -0.45 -5.25 0.15 -1.58 -1.92 0.87 -2.86 -2.05 -2.49 2.74 0.78 -4.19 1.33 -0.57 -3.17 -0.66 0.48 0.93 -4.41 -1.59 -0.23 -1.58 -2.11 0.46 -0.62 -0.32 0.02 -3.23 1.01 -0.64 2.03 -0.56 -0.52 -0.97
-1.34 -1.11 -1.36 -1.52 -0.48 -1.24 -1.26 -1.66 -0.95 -1.36 2.44 1.13 -0.71 -0.33 0.04 -0.14 0.51 0.14 0.83 -0.14 0.71 0.89 0.69 -0.04 0.52 -2.16 -2.53 -0.92 -0.33 -0.14 -0.29 -0.35 0.19 0.06 -0.9

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.