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  5. PTI_05G03120.1

PTI_05G03120.1


Description : Translation elongation factor EFTu-like, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; Transcription factor, GTP-binding domain [Interproscan].


Gene families : OG_01_0000147 (OrthoFinder) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_05G03120.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Cre06.g284750 30779093, EFG3 Protein biosynthesis.translation termination.eRF3... 0.01 OrthoFinder
EOD04843 No alias Translation elongation factor EFTu-like, domain 2;... 0.03 OrthoFinder
OT_04G01520.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
OT_13G02300.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.04 OrthoFinder
XM_002505202.1 MICPUN_53407, 53407 Elongation factor tu 0.02 OrthoFinder
XM_003060323.1 MicpuC2_60100, 60100 Elongation factor tu 0.02 OrthoFinder
lcl|BLLF01004156.1_cds_GFH29049.1_23526 HaLaN_27641, GFH29049 Elongation factor-like protein 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494727.1_3257 KAA8494727 HBS1-like protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 144 368
IPR004160 Transl_elong_EFTu/EF1A_C 470 578
IPR004161 EFTu-like_2 400 465
No external refs found!