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  5. PTI_04G05230.1

PTI_04G05230.1


Description : HD domain; RelA/SpoT; TGS; ACT domain [Interproscan].


Gene families : OG_01_0000473 (OrthoFinder) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_04G05230.1
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020961.58 tig00020961_g16680.t1 Putative GTP diphosphokinase RSH1, chloroplastic... 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498409.1_7362 KAA8498409 Putative GTP diphosphokinase RSH1, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0015969 guanosine tetraphosphate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0030099 myeloid cell differentiation IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0030154 cell differentiation IEP Enrichment
CC GO:0030173 integral component of Golgi membrane IEP Enrichment
BP GO:0030218 erythrocyte differentiation IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
CC GO:0030906 retromer, cargo-selective complex IEP Enrichment
CC GO:0031228 intrinsic component of Golgi membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
MF GO:0043531 ADP binding IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0048869 cellular developmental process IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR002912 ACT_dom 911 984
IPR007685 RelA_SpoT 364 494
IPR004095 TGS 538 597
No external refs found!