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  5. PTI_04G03480.1

PTI_04G03480.1


Description : ClpA/ClpB, AAA lid domain; ATPase, AAA-type, core; Clp ATPase, C-terminal [Interproscan].


Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_04G03480.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020996.22 tig00020996_g16936.t1 Chaperone protein ClpB2, chloroplastic OS=Oryza sativa... 0.02 OrthoFinder
Cre10.g465550 30790230, CLPD1 Chaperone protein ClpB2, chloroplastic OS=Oryza sativa... 0.02 OrthoFinder
Cre11.g467644 30775633, CLPB1 External stimuli response.temperature.Hsp... 0.01 OrthoFinder
Cz10g08290.t1 No alias Clp ATPase, C-terminal; ClpA/ClpB, AAA lid domain;... 0.01 OrthoFinder
Cz16g22050.t1 No alias Clp ATPase, C-terminal; ATPase, AAA-type, core; Clp,... 0.02 OrthoFinder
Sro1170_g248780.1 Contig3531.g27307 Protein ClpB 0.09 OrthoFinder
Sro727_g193640.1 Contig1496.g13669 Protein ClpB 0.02 OrthoFinder
TP09G00210.1 No alias ATPase, AAA-type, core; Clp ATPase, C-terminal;... 0.07 OrthoFinder
TP22G00720.1 No alias ATPase, AAA-type, core; Clp ATPase, C-terminal;... 0.07 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497241.1_970 KAA8497241 Chaperone protein ClpB 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003756 protein disulfide isomerase activity IEP Enrichment
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
BP GO:0031204 posttranslational protein targeting to membrane, translocation IEP Enrichment
CC GO:0031207 Sec62/Sec63 complex IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0065002 intracellular protein transmembrane transport IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR041546 ClpA/ClpB_AAA_lid 293 390
IPR003959 ATPase_AAA_core 155 287
IPR019489 Clp_ATPase_C 723 804
IPR003959 ATPase_AAA_core 552 716
No external refs found!