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  5. PTI_04G01630.1

PTI_04G01630.1


Description : Formin, FH2 domain [Interproscan].


Gene families : OG_01_0000242 (OrthoFinder) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_04G01630.1
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cre03.g166700 30787105, FOR1 Formin-like protein 12 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder
Dusal.0055s00017.1 33187656 Formin, FH2 domain [Interproscan]. 0.01 OrthoFinder
EOD08287 No alias Formin, FH2 domain [Interproscan]. 0.03 OrthoFinder
EOD32390 No alias Formin, FH2 domain [Interproscan]. 0.05 OrthoFinder
TP04G00680.1 No alias Formin, FH2 domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_70777 70777 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_89843 89843 Hypothetical protein 0.02 OrthoFinder
Vocar.0076s0007.1 32891317 Formin, FH2 domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58635.1_7690 PRW58635 Formin 1 0.02 OrthoFinder
lcl|LHPG02000025.1_cds_PRW20189.1_5679 PRW20189 Formin 3 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000796 condensin complex IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR015425 FH2_Formin 1152 1457
No external refs found!