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  5. PTI_04G01050.1

PTI_04G01050.1


Description : Short-chain dehydrogenase/reductase SDR [Interproscan].


Gene families : OG_01_0000065 (OrthoFinder) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_04G01050.1
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000227.39 tig00000227_g19830.t1 Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder
Sro162_g072690.1 Contig2670.g21605 Dehydrogenase/reductase SDR family member on chromosome X 0.02 OrthoFinder
Sro190_g081950.1 Contig3488.g27070 Dehydrogenase/reductase SDR family member on chromosome X homolog 0.02 OrthoFinder
TP03G08440.1 No alias Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004096 catalase activity IEP Enrichment
MF GO:0008883 glutamyl-tRNA reductase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR002347 SDR_fam 111 256
No external refs found!