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  5. PTI_03G06270.1

PTI_03G06270.1


Description : DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, N-terminal; DNA ligase, ATP-dependent, C-terminal [Interproscan].


Gene families : OG_01_0000772 (OrthoFinder) Phylogenetic Tree(s): OG0000772_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: PTI_03G06270.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_78582 78582 DNA ligase, ATP-dependent, C-terminal [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003910 DNA ligase (ATP) activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
BP GO:0006310 DNA recombination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR012309 DNA_ligase_ATP-dep_C 822 895
IPR012310 DNA_ligase_ATP-dep_cent 476 701
IPR012308 DNA_ligase_ATP-dep_N 199 406
No external refs found!