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  5. PTI_03G04900.1

PTI_03G04900.1


Description : Phosphoribulokinase/uridine kinase [Interproscan].


Gene families : OG_01_0002531 (OrthoFinder) Phylogenetic Tree(s): OG0002531_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_03G04900.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020904.22 tig00020904_g15155.t1 Photosynthesis.calvin cycle.phosphoribulokinase 0.04 OrthoFinder
Cre12.g554800 30793573, PRK1 Photosynthesis.calvin cycle.phosphoribulokinase 0.06 OrthoFinder
Cz07g08090.t1 No alias Phosphoribulokinase/uridine kinase [Interproscan]. 0.04 OrthoFinder
Dusal.0635s00010.1 33199082 Phosphoribulokinase/uridine kinase [Interproscan]. 0.01 OrthoFinder
EOD14779 No alias Phosphoribulokinase/uridine kinase [Interproscan]. 0.07 OrthoFinder
OT_04G02760.1 No alias Phosphoribulokinase/uridine kinase [Interproscan]. 0.05 OrthoFinder
Sro609_g174990.1 Contig285.g3731 Phosphoribulokinase, chloroplastic 0.11 OrthoFinder
TP04G03270.1 No alias Phosphoribulokinase/uridine kinase [Interproscan]. 0.05 OrthoFinder
Transcript_contig_89141 89141 Phosphoribulokinase/uridine kinase [Interproscan]. 0.02 OrthoFinder
Vocar.0007s0361.1 32887920 Phosphoribulokinase/uridine kinase [Interproscan]. 0.05 OrthoFinder
XM_002508138.1 MICPUN_104911, 104911 Phosphoribulokinase chloroplast precursor (PRK) 0.05 OrthoFinder
XM_003058025.1 MicpuC2_49540, 49540 Phosphoribulokinase/uridine kinase [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01000857.1_cds_GFH15490.1_9967 HaLaN_11726, GFH15490 Phosphoribulokinase 0.04 OrthoFinder
lcl|BLLF01004071.1_cds_GFH28860.1_23337 HaLaN_27417, GFH28860 Phosphoribulokinase 0.02 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33798.1_3079 PRW33798 Phosphoribulokinase 0.04 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496004.1_2002 KAA8496004 Phosphoribulokinase, chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016301 kinase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006083 PRK/URK 48 249
No external refs found!