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  5. PTI_03G02450.1

PTI_03G02450.1


Description : Short-chain dehydrogenase/reductase SDR [Interproscan].


Gene families : OG_01_0000065 (OrthoFinder) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_03G02450.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000204.28 tig00000204_g17696.t1 Short-chain dehydrogenase TIC 32, chloroplastic... 0.01 OrthoFinder
Cpa|evm.model.tig00000227.39 tig00000227_g19830.t1 Short-chain dehydrogenase TIC 32, chloroplastic... 0.01 OrthoFinder
Cre09.g398252 30780830 Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder
OT_04G04490.1 No alias Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.02 OrthoFinder
Sro190_g081950.1 Contig3488.g27070 Dehydrogenase/reductase SDR family member on chromosome X homolog 0.03 OrthoFinder
Sro305_g112690.1 Contig560.g7110 Dehydrogenase/reductase SDR family member on chromosome X homolog 0.02 OrthoFinder
Sro3965_g352250.1 Contig1669.g15029 Dehydrogenase/reductase SDR family member on chromosome X homolog 0.03 OrthoFinder
XM_002499674.1 MICPUN_55872, 55872 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.02 OrthoFinder
XM_003059227.1 MicpuC2_17965, 17965 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005759 mitochondrial matrix IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002347 SDR_fam 98 309
No external refs found!