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  5. PTI_03G01030.1

PTI_03G01030.1


Description : ABC transporter type 1, transmembrane domain; ABC transporter-like [Interproscan].


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_03G01030.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000169.4 tig00000169_g11876.t1 No description available 0.01 OrthoFinder
Cre16.g692300 30777566 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cre17.g725150 30782210 ABC transporter B family member 7 OS=Arabidopsis thaliana 0.01 OrthoFinder
EOD26441 No alias Putative ABC transporter [Ensembl]. 0.01 OrthoFinder
EOD31962 No alias Putative ABC transporter [Ensembl]. 0.02 OrthoFinder
EOD31963 No alias Putative ABC transporter [Ensembl]. 0.03 OrthoFinder
Sro1567_g282990.1 Contig3738.g28665 Leptomycin B resistance protein pmd1 0.02 OrthoFinder
Sro1916_g305200.1 Contig4310.g32500 Transporter B family member 0.04 OrthoFinder
Sro34_g021790.1 Contig4590.g34282 Lactococcin-G-processing and transport ATP-binding protein LagD 0.03 OrthoFinder
Sro84_g044670.1 Contig220.g2600 Leptomycin B resistance protein pmd1 0.01 OrthoFinder
TP03G09080.1 No alias ABC transporter-like; ABC transporter type 1,... 0.03 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56013.1_10238 PRW56013 ABC transporter B family member 4-like 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494946.1_3476 KAA8494946 Multidrug resistance protein 1B 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004363 glutathione synthase activity IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006750 glutathione biosynthetic process IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016032 viral process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Enrichment
BP GO:0032879 regulation of localization IEP Enrichment
BP GO:0032880 regulation of protein localization IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0050708 regulation of protein secretion IEP Enrichment
BP GO:0051046 regulation of secretion IEP Enrichment
BP GO:0051049 regulation of transport IEP Enrichment
BP GO:0051223 regulation of protein transport IEP Enrichment
BP GO:0070201 regulation of establishment of protein localization IEP Enrichment
BP GO:1903530 regulation of secretion by cell IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 419 569
IPR011527 ABC1_TM_dom 51 263
IPR011527 ABC1_TM_dom 277 340
No external refs found!