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  5. PTI_02G02330.1

PTI_02G02330.1


Description : CCAAT-binding factor; Nucleolar complex-associated protein 3, N-terminal [Interproscan].


Gene families : OG_01_0002310 (OrthoFinder) Phylogenetic Tree(s): OG0002310_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_02G02330.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020693.9 tig00020693_g13015.t1 No description available 0.1 OrthoFinder
Cre16.g659600 30777240 No description available 0.16 OrthoFinder
Cz10g13160.t1 No alias Nucleolar complex-associated protein 3, N-terminal;... 0.09 OrthoFinder
Dusal.0234s00006.1 33190800 Nucleolar complex-associated protein 3, N-terminal;... 0.01 OrthoFinder
EOD41759 No alias Nucleolar complex-associated protein 3, N-terminal... 0.1 OrthoFinder
OT_02G02720.1 No alias CCAAT-binding factor; Nucleolar complex-associated... 0.14 OrthoFinder
Sro1310_g261690.1 Contig1983.g16983 Nucleolar complex protein 3 homolog 0.31 OrthoFinder
TP02G04330.1 No alias CCAAT-binding factor [Interproscan]. 0.08 OrthoFinder
Vocar.0004s0041.1 32889659 Nucleolar complex-associated protein 3, N-terminal;... 0.04 OrthoFinder
XM_002506034.1 MICPUN_103981, 103981 Nucleolar complex-associated protein 3, N-terminal;... 0.2 OrthoFinder
XM_003062438.1 MicpuC2_4239, 4239 CCAAT-binding factor [Interproscan]. 0.09 OrthoFinder
lcl|BLLF01001208.1_cds_GFH17835.1_12312 HaLaN_14545, GFH17835 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01003305.1_cds_GFH26973.1_21450 HaLaN_25217, GFH26973 Nucleolar complex-associated protein 3, N-terminal... 0.05 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495933.1_1931 KAA8495933 Nucleolar complex protein 3-like 0.09 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0034457 Mpp10 complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036265 RNA (guanine-N7)-methylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0070476 rRNA (guanine-N7)-methylation IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR005612 CCAAT-binding_factor 442 594
IPR011501 Noc3_N 88 210
No external refs found!