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  5. PTI_02G01560.1

PTI_02G01560.1


Description : ABC transporter-like; ABC-2 type transporter [Interproscan].


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_02G01560.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000605.3 tig00000605_g2469.t1 ABC transporter G family member 9 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00021537.72 tig00021537_g22323.t1 ABC transporter G family member 7 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre04.g220850 30791308 ABC transporter G family member 11 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre17.g743547 30782472 ABC transporter G family member 21 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cz02g27230.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Cz03g15170.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Sro14_g010700.1 Contig1128.g10819 Putative white-brown complex homolog protein 30 0.02 OrthoFinder
Sro538_g162620.1 Contig95.g1103 Putative white-brown complex homolog protein 30 0.01 OrthoFinder
Sro997_g229380.1 Contig4588.g34260 Putative white-brown complex homolog protein 30 0.02 OrthoFinder
SymbC1.scaffold4237.3 4237.3 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Transcript_contig_55351 55351 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01002242.1_cds_GFH23307.1_17784 HaLaN_20902, GFH23307 ATP-binding cassette sub-family G member 1 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498383.1_7336 KAA8498383 ABC transporter G family member 14 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498384.1_7337 KAA8498384 ABC transporter G family member 22 0.05 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493197.1_9498 KAA8493197 ABC transporter G family member 15 0.03 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493198.1_9499 KAA8493198 ABC transporter G family member 12 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005384 manganese ion transmembrane transporter activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016032 viral process IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0030026 cellular manganese ion homeostasis IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032879 regulation of localization IEP Enrichment
BP GO:0032880 regulation of protein localization IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050708 regulation of protein secretion IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0051046 regulation of secretion IEP Enrichment
BP GO:0051049 regulation of transport IEP Enrichment
BP GO:0051223 regulation of protein transport IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055071 manganese ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0070201 regulation of establishment of protein localization IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
BP GO:1903530 regulation of secretion by cell IEP Enrichment
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 331 542
IPR003439 ABC_transporter-like_ATP-bd 43 199
No external refs found!