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  5. PTI_01G05760.1

PTI_01G05760.1


Description : Zinc finger, CHC2-type; Toprim-like; DNA primase, catalytic core, N-terminal [Interproscan].


Gene families : OG_01_0002978 (OrthoFinder) Phylogenetic Tree(s): OG0002978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_01G05760.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000865.68 tig00000865_g5117.t1 No description available 0.01 OrthoFinder
EOD11918 No alias Zinc finger, CHC2-type; Toprim-like; DNA primase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003896 DNA primase activity IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030906 retromer, cargo-selective complex IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043531 ADP binding IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
CC GO:0071203 WASH complex IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR013264 DNA_primase_core_N 324 389
IPR013264 DNA_primase_core_N 212 299
IPR002694 Znf_CHC2 84 176
No external refs found!