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  5. PTI_01G05740.1

PTI_01G05740.1


Description : Hypothetical protein


Gene families : OG_01_0001624 (OrthoFinder) Phylogenetic Tree(s): OG0001624_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_01G05740.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
PTI_01G05230.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_01G05260.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.11 OrthoFinder
PTI_01G05750.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_02G00580.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_07G01110.1 No alias Hypothetical protein 0.18 OrthoFinder
PTI_08G04200.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_12G00350.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_14G02410.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_17G00010.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.09 OrthoFinder
PTI_17G00100.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_21G01410.1 No alias Hypothetical protein 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
CC GO:0031464 Cul4A-RING E3 ubiquitin ligase complex IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!