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  5. PTI_01G04560.1

PTI_01G04560.1


Description : Hypothetical protein


Gene families : OG_01_0001624 (OrthoFinder) Phylogenetic Tree(s): OG0001624_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_01G04560.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
PTI_01G05260.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_01G05750.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_07G01110.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_17G00100.1 No alias Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!