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  5. PTI_01G00490.1

PTI_01G00490.1


Description : Proteasomal ATPase OB C-terminal domain; AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core [Interproscan].


Gene families : OG_01_0002509 (OrthoFinder) Phylogenetic Tree(s): OG0002509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_01G00490.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001187.20 tig00001187_g7469.t1 26S proteasome regulatory subunit 6A homolog OS=Oryza... 0.06 OrthoFinder
Cre10.g439150 30790715, RPT5 Protein degradation.26S proteasome.regulatory... 0.15 OrthoFinder
Cz06g04180.t1 No alias ATPase, AAA-type, core; Proteasomal ATPase OB C-terminal... 0.07 OrthoFinder
EOD04234 No alias Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.04 OrthoFinder
OT_06G04090.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.09 OrthoFinder
Sro1266_g257580.1 Contig2620.g21277 26S protease regulatory subunit 6A 0.01 OrthoFinder
Sro536_g162160.1 Contig299.g3946 26S protease regulatory subunit 6A 0.4 OrthoFinder
TP06G02610.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.26 OrthoFinder
Transcript_contig_55825 55825 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.03 OrthoFinder
Vocar.0001s1300.1 32885813 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.08 OrthoFinder
XM_002507809.1 MICPUN_107027, 107027 AAA ATPase, AAA+ lid domain; Proteasomal ATPase OB... 0.11 OrthoFinder
XM_003062143.1 MicpuC2_35637, 35637 Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.07 OrthoFinder
lcl|BLLF01001710.1_cds_GFH20854.1_15331 HaLaN_18048, GFH20854 26S protease regulatory subunit 6A 0.02 OrthoFinder
lcl|BLLF01002897.1_cds_GFH25715.1_20192 HaLaN_23722, GFH25715 AAA domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44323.1_2448 PRW44323 26S protease regulatory subunit 6A-like protein 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495478.1_1476 KAA8495478 26S protease regulatory subunit 6A-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0042176 regulation of protein catabolic process IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR032501 Prot_ATP_ID_OB 108 185
IPR003959 ATPase_AAA_core 243 381
IPR041569 AAA_lid_3 407 448
No external refs found!