1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_00G03210.1

PTI_00G03210.1


Description : UbiB domain; Aminoglycoside phosphotransferase [Interproscan].


Gene families : OG_01_0000366 (OrthoFinder) Phylogenetic Tree(s): OG0000366_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_00G03210.1
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Cz08g30050.t1 No alias LysM domain; UbiB domain [Interproscan]. 0.01 OrthoFinder
Dusal.0055s00022.1 33187653 LysM domain; UbiB domain [Interproscan]. 0.02 OrthoFinder
Dusal.0147s00003.1 33195539 UbiB domain [Interproscan]. 0.02 OrthoFinder
EOD06191 No alias Aminoglycoside phosphotransferase [Interproscan]. 0.02 OrthoFinder
Sro47_g027750.1 Contig1172.g11168 Protein kinase UbiB 0.02 OrthoFinder
Sro83_g044240.1 Contig4450.g33398 Protein kinase UbiB 0.02 OrthoFinder
XM_003062562.1 MicpuC2_52164, 52164 UbiB domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003436.1_cds_GFH27336.1_21813 HaLaN_25641, GFH27336 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Enrichment
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0001733 galactosylceramide sulfotransferase activity IEP Enrichment
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Enrichment
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005794 Golgi apparatus IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0050694 galactose 3-O-sulfotransferase activity IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR004147 UbiB_dom 180 288
IPR002575 Aminoglycoside_PTrfase 361 391
No external refs found!