PTI_00G03030.1

Description : ABC transporter type 1, transmembrane domain; ABC transporter-like [Interproscan].

Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: PTI_00G03030.1
Cluster	HCCA: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020952.7	tig00020952_g16473.t1	ABC transporter B family member 2 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cz07g26080.t1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder
Dusal.0274s00010.1	33185624	ABC transporter type 1, transmembrane domain [Interproscan].	0.01	OrthoFinder
Dusal.0407s00010.1	33197898	ABC transporter-like; ABC transporter type 1,...	0.02	OrthoFinder
Dusal.1005s00005.1	33195266	ABC transporter-like; ABC transporter type 1,...	0.02	OrthoFinder
EOD40801	No alias	ABC transporter-like [Interproscan].	0.01	OrthoFinder
OT_01G04640.1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder
Sro232_g093950.1	Contig4063.g31160	Leptomycin B resistance protein pmd1	0.02	OrthoFinder
SymbC1.scaffold281.2	281.2	ABC transporter-like; ABC transporter type 1,...	0.01	OrthoFinder
TP18G00080.1	No alias	ABC transporter-like; ABC transporter type 1,...	0.02	OrthoFinder
XM_003057414.1	MicpuC2_15544, 15544	ATP-binding cassette superfamily	0.03	OrthoFinder
lcl\|BLLF01002502.1_cds_GFH24318.1_18795	HaLaN_22091, GFH24318	ATP-binding cassette transporter	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Enrichment
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Enrichment
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Enrichment
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Enrichment
MF	GO:0003824	catalytic activity	IEP	Enrichment
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Enrichment
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Enrichment
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Enrichment
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Enrichment
MF	GO:0004620	phospholipase activity	IEP	Enrichment
MF	GO:0004629	phospholipase C activity	IEP	Enrichment
MF	GO:0004668	protein-arginine deiminase activity	IEP	Enrichment
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Enrichment
CC	GO:0005681	spliceosomal complex	IEP	Enrichment
BP	GO:0006099	tricarboxylic acid cycle	IEP	Enrichment
BP	GO:0006536	glutamate metabolic process	IEP	Enrichment
BP	GO:0006537	glutamate biosynthetic process	IEP	Enrichment
BP	GO:0006595	polyamine metabolic process	IEP	Enrichment
BP	GO:0006596	polyamine biosynthetic process	IEP	Enrichment
BP	GO:0006629	lipid metabolic process	IEP	Enrichment
BP	GO:0006694	steroid biosynthetic process	IEP	Enrichment
BP	GO:0006811	ion transport	IEP	Enrichment
BP	GO:0006812	cation transport	IEP	Enrichment
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	Enrichment
BP	GO:0008202	steroid metabolic process	IEP	Enrichment
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Enrichment
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Enrichment
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Enrichment
BP	GO:0009309	amine biosynthetic process	IEP	Enrichment
BP	GO:0009445	putrescine metabolic process	IEP	Enrichment
BP	GO:0009446	putrescine biosynthetic process	IEP	Enrichment
MF	GO:0015078	proton transmembrane transporter activity	IEP	Enrichment
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Enrichment
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Enrichment
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Enrichment
MF	GO:0015930	glutamate synthase activity	IEP	Enrichment
BP	GO:0015931	nucleobase-containing compound transport	IEP	Enrichment
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Enrichment
BP	GO:0015977	carbon fixation	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
MF	GO:0016211	ammonia ligase activity	IEP	Enrichment
MF	GO:0016229	steroid dehydrogenase activity	IEP	Enrichment
CC	GO:0016272	prefoldin complex	IEP	Enrichment
MF	GO:0016298	lipase activity	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Enrichment
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Enrichment
MF	GO:0016813	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines	IEP	Enrichment
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Enrichment
BP	GO:0019725	cellular homeostasis	IEP	Enrichment
MF	GO:0030151	molybdenum ion binding	IEP	Enrichment
CC	GO:0030173	integral component of Golgi membrane	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
CC	GO:0031090	organelle membrane	IEP	Enrichment
CC	GO:0031228	intrinsic component of Golgi membrane	IEP	Enrichment
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Enrichment
CC	GO:0031301	integral component of organelle membrane	IEP	Enrichment
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Enrichment
BP	GO:0034220	ion transmembrane transport	IEP	Enrichment
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Enrichment
BP	GO:0042592	homeostatic process	IEP	Enrichment
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Enrichment
BP	GO:0043650	dicarboxylic acid biosynthetic process	IEP	Enrichment
BP	GO:0045454	cell redox homeostasis	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment
BP	GO:0065008	regulation of biological quality	IEP	Enrichment
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	Enrichment
CC	GO:0098588	bounding membrane of organelle	IEP	Enrichment
BP	GO:0098655	cation transmembrane transport	IEP	Enrichment
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Enrichment
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Enrichment
BP	GO:1901264	carbohydrate derivative transport	IEP	Enrichment
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Enrichment
BP	GO:1902600	proton transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	326	580
IPR003439	ABC_transporter-like_ATP-bd	669	818

External Links

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PTI_00G03030.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation